Gene Ping_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1160 
Symbol 
ID4624549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1450847 
End bp1451578 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content36% 
IMG OID639796375 
Producthypothetical protein 
Protein accessionYP_942596 
Protein GI119944916 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0711118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.122094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCTT TTGAATACCC TCTGAATGAG AAAAATCGTA GTTATTTACG TTTTGAATTT 
CTCTTCGCTC AGCTTAAAAT GAGTATCTCT TTTGAGCATG TAAATGACTC AACTATTTTT
TTTAAAGCCT TATTGGAATT GCTTGAATTA GCTGAACGTA GCGACATTCG TCATGAGTTA
GTCAAAGATT TGCGTTTGTT ATCTGAGCAG ATGAAAAATT GGTTAAACCA TGATGGAGTG
GATCATAAAA AAGAGACTGA TTTAATCTCA GAAATTGAGG GACTCATTCA AGATGTACTG
CGCCTGTCAA AAAAACTGCG GTTTTTTAAA GACAACCGTT TTTTAACTTC TTTAAAACAG
CGTTTTTTTA TTCCCGGTGG TACCTGTAAT TTTGATTTGC CACAGTTTCA CTTTTGGTTA
GCCAGTGACC TGGAAAAACG CCAGAATGAT GCACAATCCT GGTTTAGCCA TTTTGCCAGT
TTAGAAAAAG CATTAACATT TTTTCTAACA ATAAAGCGTT CTCAAGCTAT CAATACAAAA
CAGATTGCTA AAAATGGTTT TTATCAGGCA GAAGTTGAAA AGTGTGGTTT TATTGTTGTC
AAAGTGGATA AAAACCAAGC CGTGTATCCT GTTATAAGCG GTCACAAACA GCGTTATTCA
ATCCGATTTA TGAGCGCCGA AAGTGAAAAA AATACGTCAG ACAGTATTGA GTTTCAGCAA
ATTTGTTGCT AG
 
Protein sequence
MVAFEYPLNE KNRSYLRFEF LFAQLKMSIS FEHVNDSTIF FKALLELLEL AERSDIRHEL 
VKDLRLLSEQ MKNWLNHDGV DHKKETDLIS EIEGLIQDVL RLSKKLRFFK DNRFLTSLKQ
RFFIPGGTCN FDLPQFHFWL ASDLEKRQND AQSWFSHFAS LEKALTFFLT IKRSQAINTK
QIAKNGFYQA EVEKCGFIVV KVDKNQAVYP VISGHKQRYS IRFMSAESEK NTSDSIEFQQ
ICC