Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1157 |
Symbol | |
ID | 4624546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1448076 |
End bp | 1448915 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639796372 |
Product | DNA ligase |
Protein accession | YP_942593 |
Protein GI | 119944913 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00148017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.132142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATATA AGATATTATT TTTTCTACTT TGTCTTTTTT CACCTTTATC TCACTCAAAC GAAACTTTAT CACCTCCGAT TCAACTTGCT ACCCTTTATC ATCAAGATAT TAATATCCAG GCATATTGGG TAAGCGAGAA ATTGGATGGC GTGCGTGCTT ATTGGGACGG CAAACAACTC ATTTCCAAGC AGGGTAATGT TTTTAATGCG CCGGGGTGGT TTATTAAAGA TTTCCCACAA CAGCGATTAG ATGGTGAGTT GTGGATTAAT CGTCATCAAT TTGAACAAGT TTCAGGGATC ACGCGAAAAC TGCAGCCCAT TGATCAAGAG TGGCAAAAAA TATCTTTTAT GATTTTTGAC CTGCCTGGCT CTGATGCTGA TTTCACATCC CGTTTACAAC AAATACAAAA ATTAATTCAG TCAAGTGACT CAGCCTATCT CAAAATGATT AAACAACAAC GAGTTGAAAA TAATCAGCAG CTGCAATTAT TATTAGAGCA GGTACTCAAT AATGGGGGTG AAGGGTTAAT GCTACATAAA GGGGAAGCTT ACTATCAGGC AAAACGCAGT AAAGATTTAA TGAAATTAAA AAAATATGAA GATGCTGAGG CGGTTGTTAT TCAGTATTTT CCCGGTAAAG GGAGAAACGC TGGTAGGCTT GGATCATTAC TTGTTGAAAC AAAAGAGGGA ATTAAATTCA AAATTGGTAC TGGATTCTCC GATCTAGAGC GTGAAAACCC ACCGCCTATT GGCGCTACAA TCACTTATAA ATACACTGGA AAAACAAATA ATAATGTTCC CCGTTTTGCC AGCTTTATGC GTATTAGAGA CGCTTATTAA
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Protein sequence | MSYKILFFLL CLFSPLSHSN ETLSPPIQLA TLYHQDINIQ AYWVSEKLDG VRAYWDGKQL ISKQGNVFNA PGWFIKDFPQ QRLDGELWIN RHQFEQVSGI TRKLQPIDQE WQKISFMIFD LPGSDADFTS RLQQIQKLIQ SSDSAYLKMI KQQRVENNQQ LQLLLEQVLN NGGEGLMLHK GEAYYQAKRS KDLMKLKKYE DAEAVVIQYF PGKGRNAGRL GSLLVETKEG IKFKIGTGFS DLERENPPPI GATITYKYTG KTNNNVPRFA SFMRIRDAY
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