| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1155 |
|---|
| Symbol | |
|---|
| ID | 4624544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1444874 |
|---|
| End bp | 1447594 |
|---|
| Gene Length | 2721 bp |
|---|
| Protein Length | 906 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639796370 |
|---|
| Product | preprotein translocase, SecA subunit |
|---|
| Protein accession | YP_942591 |
|---|
| Protein GI | 119944911 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0110227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.328192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAG GGCTAATAAC AAAAATAATA GGCAGTCGTA ATGACCGTTA TTTGAAGAAG
CTACGTAAAG TAGCAGATGA AATTAATAAG TTAGAACCAC AAATGAAAGC GCTGTCGGAT
GAGGAATTAA AAGCTAAAAC GATCGAGTTT AAAGAACGTC TCGCATCGGG TGAAAGCTTA
GATAAAATTC TTGTTGAAGC CTTTGCTGTG GTACGTAATG CATCCGAGCG TGTCTTTGGT
ATGCGTCAGT TTGATGTGCA ATTAATTGGC GGTATGGTCT TAAATGACAA TAAAATTGCT
GAAATGCGTA CTGGTGAAGG TAAAACATTA ACGGCTACAT TGCCAGCTTA TCTTAATGCA
CTAAGCGGTA AAGGTGTGCA TATTATAACG GTAAATGACT ATCTTGCAGG TCGTGATGCT
AAGTGGAATG CTAAACTTTT TGAATTTTTA GGGCTCACCG TTGGTATTAA TATATCGGGT
ATGTCCGGGG ATCAAAAACG AGCTGCTTAT GCCGCTGATA TCACTTATGG CACTAATAAT
GAATTTGGTT TTGATTACCT GCGCGATAAT ATGGCGTTTG AAGCGCAGCA GCGTGTTATG
CGCTCGTTAC ATTATGCCAT TATCGATGAA GTTGACTCAA TCTTAATCGA TGAAGCGAGA
ACGCCGCTTA TTATATCAGG CCCGACTGAT GGTGATGCTA CTTTATATAC TGAGTTGAAT
ACTGTTATCC CAATGTTAAC TCAACAGGAC AAAGAAGATA CTGAAGAATA TATCGGGGAA
GGGGATTTTA CTGTTGATGA AAAAAATAAG CAGGTTTTAC TCACTGAACG TGGCCAAGAA
AAAGTAGAGG TTATCTTACA AGAGCGTGGT TTACTTGATG AAAATCAATC ACTCTATTCA
GCCGCCAGTA TTAGTTTATT ACACCATGTC AATGCAGCAT TGCGTGCGCA TACCCTGTTT
GAAAAAGATG TTGAATATAT AGTCACAGAA AAAGGCGAAG TCGTTATTGT TGATGAACAC
TCTGGACGGA CAATGCCCGG ACGGCGCTGG TCTGAAGGTT TACACCAGGC GGTAGAAGCT
AAAGAAGGTG TACAAATTCA AAATGAGAAC CAAACATTAG CATCGATCAC TTTCCAAAAC
TATTTCCGTC TCTATGAAAA ATTGGCCGGC ATGACCGGTA CTGCTGATAC TGAGGCATTT
GAATTTCAGT CTATTTATGG TTTAGAAACC ATTGTGATTC CAACCAATCA AGCGATGATC
CGTAAAGATG GCGGAGACTT GGTTTATTTA ACTGAACAGG AAAAATATCA AGCTATTGTC
GATGATATTA AACCGCGTCT GGAGAAAGGA CAACCAATCT TGGTTGGAAC GGTATCTATT
GAACACTCTG AGTTATTATC CGATTTAATG GATAAGGCAA AAATAAAACA CAGTGTTTTA
AACGCTAAAT TTCATGCCAA AGAAGCAGAT ATTATTGCTC AAGCGGGTGC ATTAGGCAGT
GTCACCATTG CAACAAATAT GGCGGGCCGT GGTACCGATA TTGTTCTGGG TGGTAATCTG
GAAGCTCGTT TGGATAAGTT AGGCGATGTG AGCCCCAAGG AAATAGAAGC AGAAAAAGAG
CTTTGGAAAG AAGAGCATAA AAAAGTATTA AAGGCGGGTG GCTTATATAT TGTCGGTACT
GAACGGCACG AATCTCGTCG TATTGATAAC CAACTACGTG GCCGCTCTGG GCGACAAGGT
GATCCTGGTG AAAGCCGTTT CTATTTATCA ATGGAAGACT CTCTGATGCG TATCTTTGCT
TCAGAGAAAG TATCTAATAT GATGAAAAAA TTGGGCATGG AAAAAGGGGA GGCAATTGAG
CACCCTTGGG TCTCACGTGC TATTGAGAAT GCACAACGTA AAGTTGAAGG TCGAAACTTC
GATATGCGTA AATCTCTTCT CGATTTTGAT GATGTGTCTA ATGAACAACG TAAAGTGATT
TATCAGCAGC GTAACGGTGT GATTGACAGT GAAGAGATCA CAGAAACAAT TGAGCAAATC
TGGGATGATG TATTTCATAA TTGTGTTAAT GAATATGTTC CTCCCCATTC ACTCACTGAA
CAATGGGATC TTGAAGGGTT AGAGCAGCGG TTAAAAGCTG ATTTTTTAGT CGATTTACCT
GTTCGACAAT GGTCAATTGA TGATGCAAAC CTGCAAGAAG GAAGCATTCG TGAAAAAGTG
GTTGAGCATG CAAAAGCTTC ATATCTCGCG AAAAAAGAAC AGGTTGGTCC AGCAATTATT
GGTAGTTTCG AAAAATCTGT CATGCTGCAA ACTATTGATA CTTTGTGGAA AGAGCACCTT
GCTGCAATGG ATCATCTACG CCAGGGTATT CATTTACGTG GTTATGCACA AAAAGATCCT
AAACAAGAGT ACAAACGCGA GTCATTTGAA TTGTTTTTAC AAATGTTGGA AAACTTAAAA
CGTGAAGTTG TGGTTATCCT TTCAAAAGTG CAAGTGCAGT CAAAGGAAGA AGCTGACGTA
ATTCAAGAAC AACGTCGTCA GGCTGAAGCT AAGGCTCAGC TGGAAATGAA GCATGCACAG
GTAAATAAGG GGGAAGTGGT TAGCGATGAA AATACGGGCG ATGACACTTT TGTACGCAAC
GAAAAAAAAG TGGGGCGCAA TGAACCCTGC CCATGCGGCT CTGGCAAAAA ATACAAACAG
TGTCATGGTA AACTTGATTA G
|
|---|
| Protein sequence | MITGLITKII GSRNDRYLKK LRKVADEINK LEPQMKALSD EELKAKTIEF KERLASGESL
DKILVEAFAV VRNASERVFG MRQFDVQLIG GMVLNDNKIA EMRTGEGKTL TATLPAYLNA
LSGKGVHIIT VNDYLAGRDA KWNAKLFEFL GLTVGINISG MSGDQKRAAY AADITYGTNN
EFGFDYLRDN MAFEAQQRVM RSLHYAIIDE VDSILIDEAR TPLIISGPTD GDATLYTELN
TVIPMLTQQD KEDTEEYIGE GDFTVDEKNK QVLLTERGQE KVEVILQERG LLDENQSLYS
AASISLLHHV NAALRAHTLF EKDVEYIVTE KGEVVIVDEH SGRTMPGRRW SEGLHQAVEA
KEGVQIQNEN QTLASITFQN YFRLYEKLAG MTGTADTEAF EFQSIYGLET IVIPTNQAMI
RKDGGDLVYL TEQEKYQAIV DDIKPRLEKG QPILVGTVSI EHSELLSDLM DKAKIKHSVL
NAKFHAKEAD IIAQAGALGS VTIATNMAGR GTDIVLGGNL EARLDKLGDV SPKEIEAEKE
LWKEEHKKVL KAGGLYIVGT ERHESRRIDN QLRGRSGRQG DPGESRFYLS MEDSLMRIFA
SEKVSNMMKK LGMEKGEAIE HPWVSRAIEN AQRKVEGRNF DMRKSLLDFD DVSNEQRKVI
YQQRNGVIDS EEITETIEQI WDDVFHNCVN EYVPPHSLTE QWDLEGLEQR LKADFLVDLP
VRQWSIDDAN LQEGSIREKV VEHAKASYLA KKEQVGPAII GSFEKSVMLQ TIDTLWKEHL
AAMDHLRQGI HLRGYAQKDP KQEYKRESFE LFLQMLENLK REVVVILSKV QVQSKEEADV
IQEQRRQAEA KAQLEMKHAQ VNKGEVVSDE NTGDDTFVRN EKKVGRNEPC PCGSGKKYKQ
CHGKLD
|
|---|
| |