| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1149 |
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| Symbol | |
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| ID | 4623890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1438800 |
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| End bp | 1439720 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639796364 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_942585 |
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| Protein GI | 119944905 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.927057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.917542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTAG ATTTTGGTAA AGTTGCCGTC TTATTTGGTG GTCACAGTGC GGAGCGTGAA
GTGTCGTTAC GTTCTGGAAA AGCGGTGTTA AATGCATTGT TGCGGCAAGG GATTGATGCC
TATGCTATTG ATCCTAAGTT TGATGATTTA TTGCAGCTAA AACAATTAAA TTTTGATCGT
GTTTTTATTG CTTTGCATGG GCGAGGAGGT GAAGATGGTG TTATACAGGG ATTTTTAAGT
ACATTGGATA TTCCCTATAC AGGCAGTGAT GTTTTAAGTT CGGCTATTGC AATGGATAAA
TCAAAGACCA AGCAAATTTG GCAAAGTCTG CAATTACCAA CCGCCCAGTA CCGAATTATC
ATTAAAGAGG CATTTGACCC CGCACAGGCT GAACAGATAC TGGCAGGTTT ATCGGGCATA
GCGATAGTTA AGCCCGTCAG TGAAGGTTCC AGTCTCGGTA TGGCAAAAGT AAGCACTGCA
AAGGAGCTTA TTAAAGCACT GACTGAGGCT TTTAAATTTG ATCAGACAGT ATTACTTGAA
ACGTGGATCA CCGGGCAAGA GTACACTGTA TCAATCTTAA ATGGAAAAGC ATTGCCGGCT
ATCCGGATGC ACACTAATAA TACATTTTAT GATTATCAGG CTAAGTATCA ATCGACGGAC
ACACAATATT ATTGTCCTTG TGGTCTTGAA CAAGAAAAGC TCGCTGAATT AAATCAATTA
GCGGTAGATG CCTTTGCTGC CATTGGGTGT CGCGGATGGG GACGAGTGGA TTTTATGCTG
GATAAGTCAG GGCAATGGTA TTTATTAGAA GTCAATACCG TGCCCGGTAT GACAGAAACA
AGCTTAGTGC CTAAAGCTGC AAAAGAAGCG GGTTACGATT TTGATCAGCT GACCATCGAA
ATTTTAAAGC AAACACTGTA A
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| Protein sequence | MSLDFGKVAV LFGGHSAERE VSLRSGKAVL NALLRQGIDA YAIDPKFDDL LQLKQLNFDR
VFIALHGRGG EDGVIQGFLS TLDIPYTGSD VLSSAIAMDK SKTKQIWQSL QLPTAQYRII
IKEAFDPAQA EQILAGLSGI AIVKPVSEGS SLGMAKVSTA KELIKALTEA FKFDQTVLLE
TWITGQEYTV SILNGKALPA IRMHTNNTFY DYQAKYQSTD TQYYCPCGLE QEKLAELNQL
AVDAFAAIGC RGWGRVDFML DKSGQWYLLE VNTVPGMTET SLVPKAAKEA GYDFDQLTIE
ILKQTL
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