Gene Ping_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1144 
Symbol 
ID4623885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1432584 
End bp1433666 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content40% 
IMG OID639796359 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_942580 
Protein GI119944900 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCT GGTTAGCAGA GTTACTTTCA AGCCAATTTA CATTTTTAAA TGTACTAACA 
TATCTGTCAG TGCGAACAGT TATGGCGGTA TTAACCGCGT TAGCATTTTC GCTGTTTTTT
GGGCCTAAAT TAATACGTTT TTTACAAAAG TTTCAGATTG GTCAAATCGT CCGGCAGGAT
GGCCCAGAAT CTCATTTCAG TAAGGCTGGG ACGCCAACCA TGGGTGGTAT TTTGATTCTT
GGTGCAATCA CCTTCTCAAG CTTATTATGG GCTAGATTGG ACAATTCTTA TGTTTGGATA
GTGCTGTTCA CAACGCTTGC TTTTGGTGCA ATTGGTTTTA TGGATGACTA TTTAAAAGTG
GTCCGTAAAC ACCCTGACGG TTTAATTGCC CGCTGGAAAT ATTTTTGGCA ATCTGTTACT
GCGCTTGTTC TTGCTGTTGT CTTATTTTTA AGCGCAACAA CGCCGGCGGA ACTGACTTTT
GTTATGCCAT TTTTTAAACA ATATATGCCT TATCTTGGTT TGGCTTTTAT TCCCTTAGTC
TATTTTACCG TGGTAGGTAG CAGTAATGCT GTTAATTTGA CCGATGGTTT AGATGGATTG
GCTATTATGC CGACTGTGAT GGTTGCAGCT GCATTTGCAT TAATTGCCTA CCTGACAAGC
CATGTTAATT ATGCGCATTA TTTGTATATT CCCTACATTC CTAAGGCCAG TGAATTGGTG
GTTATCTGCG GTACTATAGT AGGAGCGGGG TTAGGGTTTT TATGGTTCAA TACCTATCCT
GCACAAGTGT TTATGGGTGA TGTGGGTTCA CTGGCATTAG GGGCTTTACT CGGTGTAATT
GCTGTTTTGG TTCGTCAAGA AATCCTGCTG GTTATTATGG GGGGGATATT TGTAGTGGAA
ACACTGTCGG TTATTTTACA GGTAGGTTCA TATAAAATGC GTAAACGGCG TATTTTTAGA
ATGGCACCCA TTCATCATCA TTATGAGAAA AAAGGTTGGC CTGAGCCGCG TGTTATTGTC
CGTTTTTGGA TTATTACCAT AGTGTTAGTA TTAATAGGTT TAGTGACCTT AAAGGTACGT
TAA
 
Protein sequence
MIVWLAELLS SQFTFLNVLT YLSVRTVMAV LTALAFSLFF GPKLIRFLQK FQIGQIVRQD 
GPESHFSKAG TPTMGGILIL GAITFSSLLW ARLDNSYVWI VLFTTLAFGA IGFMDDYLKV
VRKHPDGLIA RWKYFWQSVT ALVLAVVLFL SATTPAELTF VMPFFKQYMP YLGLAFIPLV
YFTVVGSSNA VNLTDGLDGL AIMPTVMVAA AFALIAYLTS HVNYAHYLYI PYIPKASELV
VICGTIVGAG LGFLWFNTYP AQVFMGDVGS LALGALLGVI AVLVRQEILL VIMGGIFVVE
TLSVILQVGS YKMRKRRIFR MAPIHHHYEK KGWPEPRVIV RFWIITIVLV LIGLVTLKVR