Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1143 |
Symbol | |
ID | 4623884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1431075 |
End bp | 1432544 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796358 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_942579 |
Protein GI | 119944899 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTA CCACAATAAA AAAAGAAGAA GGTATTAACA TGATCAGCCT AACACTTGCT GAAATAGCCA AAGCAACCGC TGGGCAGATA ATTAATTGTG AGCACCCAGA GGCAGTTTTC AATAATATCA GTACCGATAC CAGACAAATC AAATCGGGTG ATCTTTTTAT CGCACTGCGC GGTGAACGCT ATGATGCGCA CCAATTTTTA GAAAAAGCCG TGCAACAGGG GGCGGGGGCG TTATTAATTG ATCAGAAAAA AAGGAGTGAT TTACCCTGTG TTCTGGTACA AGATACGAGA ATTGCATTAG GCCTATTAGC GAGTTATGTC AGGCAGCAAA TAGGCAGGTT AAAATGCGCC GCTATTACCG GCAGTAATGG TAAAACAACC ACCAAAGAAT TACTCAGTGC AATACTTTGC TGCCATACTG GTAATAATGA AAATGTGTTA GCAACCGCGG GTAATTTTAA TAATGATATC GGTTTACCCC TTACTTTATT ACGTTTAACC GAAAAAACAC GTTATGCCGT GGTCGAGTTA GGTGCTAACC ATTTAGGTGA AATTGCCTAT ACGGCGCAAC TTACAAAACC CGATGTGGCA TTAATAAATA ATGTAATGCC TGCTCACCTT GAAGGTTTTG GATCGCTGCA GGGTGTCGCA CAAGCAAAGG GGGAAATTTG GTCAAGTCTT GGAGACACTG GCATCGCGGT GGTGAATTTA GATTCTGATT TCGCCAGTGA GTATTTAACC CAATTAAAAA AATTAAATAG ACAGGTATTC ACATTTTCTA AAGAGAGTGA AAAAGCCCAT GTGAGTGCGT CAAATATTAT TTTTTCTTCC TTGGGTAAGG CATCTTTTCG GCTTAATGTG ATGCTTAATA GGGACCCGCA AGCAATCTCT ATTCAATTGA ATTTAGCTGG ATTACATAAT GTAAGTAATG CGCTTGCTGC CGCAACAATG GCACTTGCAT TAGGCTGTAA CCTGAAGGAT ATACAGGCGG GTCTAGGTTT AGTGCAACAG GTTGAGGGGC GAGTTGATAG TCGTGAACTC AATAAATTAG TGACCTTGAT TGATGATACT TATAATGCTA ACCCTGCTTC TGTGAAAGTG GCTATTGATC TGCTCCAACA ATACGCTTCT TCCCATCTTC TTGTTCTTGG CGACATGGCT GAATTAGGCG ATTTTAGTGA ACATGAGCAC TTTCTGATTG GTGAGTATGC AGCGCAAAAA GGGATTCAAA CGTTAATCAC TTTCGGTAAG CTTACGTTTA AAACATACCA GGCTTTCAAG CAAGCAGGGC AGGGTGAAGC CCTGCATTTT GCTGATAAGA AACAATTAAA TGCTTACTTA GAAAACAGAC TATTAGAGCA AAAAAATAAG CTGACGATCT TAGTGAAAGG CTCGCGTGGT TCAAAAATGG AAGAGGTTGT TAACTTTATC AAGCAGGCAG CCAATAAATT CAGCGCTTGA
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Protein sequence | MTFTTIKKEE GINMISLTLA EIAKATAGQI INCEHPEAVF NNISTDTRQI KSGDLFIALR GERYDAHQFL EKAVQQGAGA LLIDQKKRSD LPCVLVQDTR IALGLLASYV RQQIGRLKCA AITGSNGKTT TKELLSAILC CHTGNNENVL ATAGNFNNDI GLPLTLLRLT EKTRYAVVEL GANHLGEIAY TAQLTKPDVA LINNVMPAHL EGFGSLQGVA QAKGEIWSSL GDTGIAVVNL DSDFASEYLT QLKKLNRQVF TFSKESEKAH VSASNIIFSS LGKASFRLNV MLNRDPQAIS IQLNLAGLHN VSNALAAATM ALALGCNLKD IQAGLGLVQQ VEGRVDSREL NKLVTLIDDT YNANPASVKV AIDLLQQYAS SHLLVLGDMA ELGDFSEHEH FLIGEYAAQK GIQTLITFGK LTFKTYQAFK QAGQGEALHF ADKKQLNAYL ENRLLEQKNK LTILVKGSRG SKMEEVVNFI KQAANKFSA
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