| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1134 |
|---|
| Symbol | |
|---|
| ID | 4625054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1421821 |
|---|
| End bp | 1422921 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639796349 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_942570 |
|---|
| Protein GI | 119944890 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.536387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGCA CGCAAGCTCA AAAGAGCATT TTTTATCGTT TGCACATAGA TCCGCTGCTA
CTAATAGGAT TATTTTCTTT AATGGGGTTA AGCCTAACCA TATTATATTC TGTTGCTGGT
TATGAGATGT TAATCAGGCA AGTCATTCGT TTAGCCATTG CCCTTGCCGT CATGTTTGTA
ATAGCGCAAA TTCCCCCTGA AATTTACCAA CGCTGGACAC CGGCTATTTT TGTTATTATT
ATATTACTGC TAATCGCAGT GCTGGTCATT GGTCATACAG GCAAAGGCGC GCAACGCTGG
TTAGACCTGG GTTTTACAAA ATTTCAACCG TCTGAAATAA TGAAACTGAT TATGCCATTT
ATGGTCGCTT ATTATATAAG CGAATACAAT TTACCACCAC GTTTAAAACA GATTTTTGTA
TCCTTGTTAA TTGTCCTTGT CCCGACCCTC TTAATAGCAG TACAACCAGA TTTAGGCACT
GCTATATTAG TCGCGTCATC GGGTGTTTTT GCACTTTTCC TTTCAGGGAT TTCATGGTTG
TATCTTTCAA TAGCCGCGAC CGCTTTGATC GCATTTGTCC CCGTCCTGTG GTTTTATTTA
ATGCATGATT ATCAGCGAAG TCGTGTATTA ACTCTGTTTA ATCCTGAATC TGATCCGCTT
GGCGCGGGGT ATCATATTAT CCAGTCCAAA ATAGCGATCG GTTCAGGTGG CCTCTCGGGT
AAAGGTTGGT TACAAGGAAC ACAATCTCAG CTTGAATTTT TACCTGAACG CCACACTGAT
TTTATTTTTT CTGTTTTTTC AGAAGAGTTT GGTTTTATCG GTATCTTAAT GTTGTTAACC
ATTTATCTGT TTATTATTGC GCGTGGTTTA TGGATAGCAA ACAAAGCCCA AGATGCTTTC
ACAAAATTAG TTGCAGGCAG TATTACCCTT ACTTTTTTTG TTTATGTTTT TGTAAATATT
GGCATGGTGA GTGGGTTATT ACCCGTAGTA GGCGTCCCCT TGCCGTTAAT AAGTTATGGA
GGCACCTCAA TTGTTACTTT AATAGCCGGT TTCGGGGTGT TAATGTCTAT TAATACCCAT
AAACGTTTTA ATACAAACTG A
|
|---|
| Protein sequence | MLSTQAQKSI FYRLHIDPLL LIGLFSLMGL SLTILYSVAG YEMLIRQVIR LAIALAVMFV
IAQIPPEIYQ RWTPAIFVII ILLLIAVLVI GHTGKGAQRW LDLGFTKFQP SEIMKLIMPF
MVAYYISEYN LPPRLKQIFV SLLIVLVPTL LIAVQPDLGT AILVASSGVF ALFLSGISWL
YLSIAATALI AFVPVLWFYL MHDYQRSRVL TLFNPESDPL GAGYHIIQSK IAIGSGGLSG
KGWLQGTQSQ LEFLPERHTD FIFSVFSEEF GFIGILMLLT IYLFIIARGL WIANKAQDAF
TKLVAGSITL TFFVYVFVNI GMVSGLLPVV GVPLPLISYG GTSIVTLIAG FGVLMSINTH
KRFNTN
|
|---|
| |