Gene Ping_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1133 
Symbol 
ID4625053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1421032 
End bp1421814 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID639796348 
Productrare lipoprotein A 
Protein accessionYP_942569 
Protein GI119944889 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0478677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAT TTAAAATATC ACTCATATTT CTGCTGACTA TGATGCTTAT TGGATGCAGC 
TCTCAGGATA CTGCCGACGG CCGTTATCAA ATAGAGAATG ATCACCGTCC GGATAACCCT
CCCCCATTGG GTCATGTTGA AGATGTTAAT CCTCGTTATG AACCTTATTC TCTGGGTGGC
AATAAAGATT ATACTGTGCG TGGTATTGAT TACAGGGTGC TGACAGGTAT TACCAAGCTG
AGCGAAAGAG GCATAGCCTC GTGGTATGGT AATAAATTTC ATGGCCACTT AACCTCAAAT
GGTGAACGTT ATGACATGTT TGCAATGACC GCAGCCCATA AAAACTTACC TTTACCCAGT
TATGTTAGGG TAATAAATTT GGAAAATAAC AAACGGATCG TTGTGCGGGT CAATGACCGA
GGACCCTTTC ACGAAGGACG AATTATTGAT CTGTCATACG CTGCGGCCTA TAAACTCGAT
ATTTTAAAAA CGGGTACGGC AAAAGTTGAA ATTCAACTTC TCCATTTCCC TGTACAGGAA
GATTTGAGCA ATCAGTTTAA CGGCGATTAT TACATTCAGT ACTTAGTCAC TTATTCCGCA
GACAAAGCTA ATGATTTAGG TAAAAAATAC AGGGCTGAAT ATCAAGTAAA AAGTTTATTT
ATCGAAGAAG ATGAACTTTA CAAATTACGT TTAGGACCCT TTAATAGTCA GTTAAGAGCA
GAAAAAATAT TGGCTGAAAT AAAAAATGGT TACCCGCAGG CATTTATTGT GCATAAGAAA
TAA
 
Protein sequence
MRKFKISLIF LLTMMLIGCS SQDTADGRYQ IENDHRPDNP PPLGHVEDVN PRYEPYSLGG 
NKDYTVRGID YRVLTGITKL SERGIASWYG NKFHGHLTSN GERYDMFAMT AAHKNLPLPS
YVRVINLENN KRIVVRVNDR GPFHEGRIID LSYAAAYKLD ILKTGTAKVE IQLLHFPVQE
DLSNQFNGDY YIQYLVTYSA DKANDLGKKY RAEYQVKSLF IEEDELYKLR LGPFNSQLRA
EKILAEIKNG YPQAFIVHKK