Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1133 |
Symbol | |
ID | 4625053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1421032 |
End bp | 1421814 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639796348 |
Product | rare lipoprotein A |
Protein accession | YP_942569 |
Protein GI | 119944889 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0478677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAAAT TTAAAATATC ACTCATATTT CTGCTGACTA TGATGCTTAT TGGATGCAGC TCTCAGGATA CTGCCGACGG CCGTTATCAA ATAGAGAATG ATCACCGTCC GGATAACCCT CCCCCATTGG GTCATGTTGA AGATGTTAAT CCTCGTTATG AACCTTATTC TCTGGGTGGC AATAAAGATT ATACTGTGCG TGGTATTGAT TACAGGGTGC TGACAGGTAT TACCAAGCTG AGCGAAAGAG GCATAGCCTC GTGGTATGGT AATAAATTTC ATGGCCACTT AACCTCAAAT GGTGAACGTT ATGACATGTT TGCAATGACC GCAGCCCATA AAAACTTACC TTTACCCAGT TATGTTAGGG TAATAAATTT GGAAAATAAC AAACGGATCG TTGTGCGGGT CAATGACCGA GGACCCTTTC ACGAAGGACG AATTATTGAT CTGTCATACG CTGCGGCCTA TAAACTCGAT ATTTTAAAAA CGGGTACGGC AAAAGTTGAA ATTCAACTTC TCCATTTCCC TGTACAGGAA GATTTGAGCA ATCAGTTTAA CGGCGATTAT TACATTCAGT ACTTAGTCAC TTATTCCGCA GACAAAGCTA ATGATTTAGG TAAAAAATAC AGGGCTGAAT ATCAAGTAAA AAGTTTATTT ATCGAAGAAG ATGAACTTTA CAAATTACGT TTAGGACCCT TTAATAGTCA GTTAAGAGCA GAAAAAATAT TGGCTGAAAT AAAAAATGGT TACCCGCAGG CATTTATTGT GCATAAGAAA TAA
|
Protein sequence | MRKFKISLIF LLTMMLIGCS SQDTADGRYQ IENDHRPDNP PPLGHVEDVN PRYEPYSLGG NKDYTVRGID YRVLTGITKL SERGIASWYG NKFHGHLTSN GERYDMFAMT AAHKNLPLPS YVRVINLENN KRIVVRVNDR GPFHEGRIID LSYAAAYKLD ILKTGTAKVE IQLLHFPVQE DLSNQFNGDY YIQYLVTYSA DKANDLGKKY RAEYQVKSLF IEEDELYKLR LGPFNSQLRA EKILAEIKNG YPQAFIVHKK
|
| |