Gene Ping_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1124 
Symbol 
ID4625044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1408690 
End bp1409091 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content37% 
IMG OID639796339 
Productrod shape-determining protein MreD 
Protein accessionYP_942560 
Protein GI119944880 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.974415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.147001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATG CTTTTCGTCC CGATTGGATG ATCCTTATTA TTTTTTATTG GGTACTCGCA 
TTACCGCATC GGGTTAGCAT CGTGCATGCG TTTATTTTAG GGGTAGTATT TGACCTTTTA
TTAGGCTCTA CGTTAGGCAT GCATGCCTTA TTATTTTCAT TTTTAGCCTA CATAGTCATT
ACCAATTACC AACTTTTTCG TTATTTCACT CTGGTACAAA CAACCCTCTT AGTCGGTTTG
TATTCTTTAC TGTCGAAACT GGCGTTATAT TTGATGGCAT CAAGCTTACA AGATATTATT
TTACATCAAT CTTATTTCTG GTCAGTCTTT ACCTCGATGC TGGTTTGGCC CTGGTTTTTT
CTTTTTTTGC GTTTTATTCG TCGCCGTTTT AAGGTCGTAT AA
 
Protein sequence
MLNAFRPDWM ILIIFYWVLA LPHRVSIVHA FILGVVFDLL LGSTLGMHAL LFSFLAYIVI 
TNYQLFRYFT LVQTTLLVGL YSLLSKLALY LMASSLQDII LHQSYFWSVF TSMLVWPWFF
LFLRFIRRRF KVV