| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1123 |
|---|
| Symbol | |
|---|
| ID | 4625043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1407645 |
|---|
| End bp | 1408625 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639796338 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_942559 |
|---|
| Protein GI | 119944879 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.274072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA TTTTTACGCG CGGCCCTTCA TTTTTATTAA GACTATCCAT AGTGGTAGTT
TTTTCGGTTT TTTTATTTGT TGCTGACAGC AACTTCAATC TCTTTGCATC ATCACGTATT
TATTTAAACT CCCTGGTCAG CCCTGTGCAA TACGTTGCTG ATCTGCCTGA AAAATTATTC
AGTGCCATCT CTGCTAGTGT GATGACTCGC CATGAGTTAA AAGCGCGTAA TCAACAGTTA
GAAAAAGACA ATTTACATCT CAAAGCTGAC CGCCTATTAC TCACCCAATT AGAAAATGAA
AATAAGCAGT TACGTGAGCT GCTCAGCTCA AATCGCACCT TTACCAACAA AAGAATGATA
ACCGAAGTGA TGAGTTTACG CTCAGATCCC TTTTCTCATC AGTTATTGAT CGATAAAGGC
GCGGTAAACG GTGTTTATGT CGGCCAACCT GTTATTAATG AAGATGGTGT GGTTGGACAA
GTTTCTCAGG TAGGCAGTAC AACCAGTCGG GTTTTACTGA TTGTTGATGT AAGCCATGGT
ATTCCGGTGC GCGTTCAGCG TAATGATCTT ATTGCCGTGC TCCATGGTAG TGGTGATTGG
AATAGGCTAA ATGTGCCTTT TGTACAAAGT AATGCCGATT TAAAAGAAGG TGATTTACTG
GTCACGTCAG GTTTGGGGGG GCGTTTCCCT GCAGGTTACC CGGTTGCGAC AATAAGCCAT
GTTAATTATC AAGAAGGCGC GGCTTACGCT GATGTGAGCG CAACACCTGT TGCTCCCCTC
CACCGCAGCC GTTATTTATT GTTGTTATGG AATGAGGATC AATATAATGA ATCTGATTTA
TCAAAGGATA GATTAACAAC ATCAGCGGCA CTGGCCACAG AGAATGCTGA TAATTCAAAG
ACAAGCCCTG ATTCTCTGAA CACGCTAGAG ACAGACAAAA AAATCGAACC GCTGGAATCG
AAAAATGTCA TTGTTCAGTA A
|
|---|
| Protein sequence | MKTIFTRGPS FLLRLSIVVV FSVFLFVADS NFNLFASSRI YLNSLVSPVQ YVADLPEKLF
SAISASVMTR HELKARNQQL EKDNLHLKAD RLLLTQLENE NKQLRELLSS NRTFTNKRMI
TEVMSLRSDP FSHQLLIDKG AVNGVYVGQP VINEDGVVGQ VSQVGSTTSR VLLIVDVSHG
IPVRVQRNDL IAVLHGSGDW NRLNVPFVQS NADLKEGDLL VTSGLGGRFP AGYPVATISH
VNYQEGAAYA DVSATPVAPL HRSRYLLLLW NEDQYNESDL SKDRLTTSAA LATENADNSK
TSPDSLNTLE TDKKIEPLES KNVIVQ
|
|---|
| |