Gene Ping_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1115 
Symbol 
ID4626245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1398511 
End bp1399599 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content44% 
IMG OID639796331 
Productphosphoserine aminotransferase 
Protein accessionYP_942552 
Protein GI119944872 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.27291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA TATTTAATTT CTGCGCAGGT CCGGCTATGT TACCTGAAGC CGTTATGGAA 
AAAGCACAAG AAGAGTTTTG TAACTGGCAA GGGCTGGGGG TTTCTGTGAT GGAAATCAGC
CACCGTAGTC CCGAATATAT TGAAATGGCC GAGCAAGCTG AGCAAGATCT GCGTGATTTG
TTGGCTGTAC CTGATAATTA TAAAGTCCTT TTTTGTCATG GTGGTGGACG CGGACAATTT
GCTGCGGTGC CATTAAATCT GCTGGGCGAT AAACTGGATG TGGATTATTT AATCAGCGGA
CAATGGTCAA AGTTGGCGGT AGATGAAGCG AAAAAACACG CCCGAGTGAC CGAAACCAGT
GTTCTCAGCG AAACAGCCGA GGGTAAGGTA AGTGTTAAAG CCGCTGCTGA CTGGAACGTT
AATGCTGGCG CCGCTTACGT GCATTACTGC CCCAATGAAA CAATCGAAGG TATTGAAATT
TTTGAAGTAC CTGAAACAGG GGTTGTGCCG CTGGTTGCCG ATATGAGTTC AACGATTTTA
TCCCGTCCAA TTGATGTTTC TAAATTCGGT GTTATTTACG CTGGCGCACA AAAAAATATC
GGCCCATCGG GTTTGGCAAT CGTGATCGTG CGTGACGATT TAATCGGCAA AGCACGCAAA
GTTATTCCGT CTATTTTTGA TTATAAAGTG CAGGCTGATG CCGGATCAAT GTTTAATACT
CCGCCAACTT ATTCATGGTA CCTGGCAGGC CTCGTTTTTA AGTGGTTAAA AGAGCAGGGT
GGTTTGGTCG AAATAGAAAA GAAAAATATA GCAAAAGCCG AGTTACTTTA TAATTTTATC
GACAGTTCCA AGTTGTATCG CAATAATATC GACAAATCAG TGCGTAGCCG TATGAATATT
CCCTTTCAAC TTGCAGATGA AAACTTAAAT GCACTTTTTC TAAAAGAGTC TAAAGACGCT
AACCTGCTGA CCCTCAAAGG TCATCGGGCA GTCGGTGGAA TGCGTGCCAG TATCTACAAT
GCAATGCCAA TTGAAGGTGT GCAGGCGTTA GTTGATTTTA TGGCAAAGTT TGAAGCTAAC
TACGCATAA
 
Protein sequence
MSKIFNFCAG PAMLPEAVME KAQEEFCNWQ GLGVSVMEIS HRSPEYIEMA EQAEQDLRDL 
LAVPDNYKVL FCHGGGRGQF AAVPLNLLGD KLDVDYLISG QWSKLAVDEA KKHARVTETS
VLSETAEGKV SVKAAADWNV NAGAAYVHYC PNETIEGIEI FEVPETGVVP LVADMSSTIL
SRPIDVSKFG VIYAGAQKNI GPSGLAIVIV RDDLIGKARK VIPSIFDYKV QADAGSMFNT
PPTYSWYLAG LVFKWLKEQG GLVEIEKKNI AKAELLYNFI DSSKLYRNNI DKSVRSRMNI
PFQLADENLN ALFLKESKDA NLLTLKGHRA VGGMRASIYN AMPIEGVQAL VDFMAKFEAN
YA