Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1100 |
Symbol | |
ID | 4625813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1370597 |
End bp | 1371337 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796316 |
Product | radical SAM domain-containing protein |
Protein accession | YP_942538 |
Protein GI | 119944858 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.256897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACTT ACTTATTGCG TTACACTGAC AAGATCCTGC TACCAATCGA GCATAATAAA GCAATGAATC AAAACTATAA AGTAAACGAA TTATTTCAAA CTATTCAGGG AGAAGGTTTT AATACCGGTG TACCTGCTAT TTTTCTACGT TTACAGGGGT GTGATGTAGG TTGTGCCTGG TGCGATACTA AACATACTTG GGAAATAAAC CCAGATAAAC AGACAGAACT GATTTTATTA ACCGGCAGCA GTAATGAATC AACACGTTGG GCAAATGTTA ACGCGCGGGA GATAGTTGCT GAAATTAAAC GTCTTGGATA TAGCGCTAAT TTAGTGGTGA TCACCGGTGG CGAACCTTGT CTTGCAGACT TGCGAGAGTT AACCACTGTA CTGCATGAGT TTGACTTTAA AACTCAGATC GAAACCAGTG GCACTTATCC TGTTTTAGTT GCGCCGCCGA CCTGGGTGAC TCTCTCTCCA AAGGTTAATA TGCGCGCAGG TAAAGTTGTT TTGCAATCGG CTCTTGAACG TGCCGATGAA ATTAAACATC CTGTTGGTAC TGAAAAAGAT ATCGAACAGT TAGATGCATT ATTGGAAAAT CTTAAATCGA TAGAAGATAA AGTTATCTGT TTACAGCCAA TTTCGCAAAA GGTAAAAGCG ACGCTTTTAT GCAGTCAGGT CTGTATCGAA CGTAACTGGC GTTTATCGGT GCAGATGCAT AAGTATCTGG GAATCGATTA G
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Protein sequence | MFTYLLRYTD KILLPIEHNK AMNQNYKVNE LFQTIQGEGF NTGVPAIFLR LQGCDVGCAW CDTKHTWEIN PDKQTELILL TGSSNESTRW ANVNAREIVA EIKRLGYSAN LVVITGGEPC LADLRELTTV LHEFDFKTQI ETSGTYPVLV APPTWVTLSP KVNMRAGKVV LQSALERADE IKHPVGTEKD IEQLDALLEN LKSIEDKVIC LQPISQKVKA TLLCSQVCIE RNWRLSVQMH KYLGID
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