Gene Ping_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1100 
Symbol 
ID4625813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1370597 
End bp1371337 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content41% 
IMG OID639796316 
Productradical SAM domain-containing protein 
Protein accessionYP_942538 
Protein GI119944858 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.256897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACTT ACTTATTGCG TTACACTGAC AAGATCCTGC TACCAATCGA GCATAATAAA 
GCAATGAATC AAAACTATAA AGTAAACGAA TTATTTCAAA CTATTCAGGG AGAAGGTTTT
AATACCGGTG TACCTGCTAT TTTTCTACGT TTACAGGGGT GTGATGTAGG TTGTGCCTGG
TGCGATACTA AACATACTTG GGAAATAAAC CCAGATAAAC AGACAGAACT GATTTTATTA
ACCGGCAGCA GTAATGAATC AACACGTTGG GCAAATGTTA ACGCGCGGGA GATAGTTGCT
GAAATTAAAC GTCTTGGATA TAGCGCTAAT TTAGTGGTGA TCACCGGTGG CGAACCTTGT
CTTGCAGACT TGCGAGAGTT AACCACTGTA CTGCATGAGT TTGACTTTAA AACTCAGATC
GAAACCAGTG GCACTTATCC TGTTTTAGTT GCGCCGCCGA CCTGGGTGAC TCTCTCTCCA
AAGGTTAATA TGCGCGCAGG TAAAGTTGTT TTGCAATCGG CTCTTGAACG TGCCGATGAA
ATTAAACATC CTGTTGGTAC TGAAAAAGAT ATCGAACAGT TAGATGCATT ATTGGAAAAT
CTTAAATCGA TAGAAGATAA AGTTATCTGT TTACAGCCAA TTTCGCAAAA GGTAAAAGCG
ACGCTTTTAT GCAGTCAGGT CTGTATCGAA CGTAACTGGC GTTTATCGGT GCAGATGCAT
AAGTATCTGG GAATCGATTA G
 
Protein sequence
MFTYLLRYTD KILLPIEHNK AMNQNYKVNE LFQTIQGEGF NTGVPAIFLR LQGCDVGCAW 
CDTKHTWEIN PDKQTELILL TGSSNESTRW ANVNAREIVA EIKRLGYSAN LVVITGGEPC
LADLRELTTV LHEFDFKTQI ETSGTYPVLV APPTWVTLSP KVNMRAGKVV LQSALERADE
IKHPVGTEKD IEQLDALLEN LKSIEDKVIC LQPISQKVKA TLLCSQVCIE RNWRLSVQMH
KYLGID