Gene Ping_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1092 
Symbol 
ID4625805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1362505 
End bp1363341 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content40% 
IMG OID639796308 
Productaminotransferase, class IV 
Protein accessionYP_942530 
Protein GI119944850 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR03461] aminodeoxychorismate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0796265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATAA ACGGCACTGA ATCTACAACA ATTGCAGCCG ATGACCGGGG TTTAGCCTAC 
GGAGATGGTC TATTTTCAAC CATAAAAGTT GAACGTGGTA TTGTGCAACT GTGGGATTAT
CACCTGCAAA GGTTGCAATT GGGTGCAAAA AAGCTTTTTT TCCCTGAAGT TGATTGGTTA
TTATTATCAA GCGAACTGCA CTATTTAGCA AAGACGGTTG CTGAGCAGCC TTTTGCTGTG
ATTAAAGTAA TGCTAACACG AGGCTCCGGG GGACGGGGGT ATAGTATTCA AGGATGCAGT
TCACCACAAC GTATCTTATC TGTCCATCCT TACCCGGTCT TTTATCAACA ATGGCAAAGG
GATGGATTAA AGGTAATCCA ATGCAGGCAG AAATTAGCGA TTAATAGACA ATTAGCGGGT
TTAAAAACAT TAAATCGTTT AGAGCAAATA TTGATAAAAC ATGAATTAGA AGCGCAAGAT
GCCTTTGAGG GGATCGTTTG TGATAATGAT GGCCACGTTA TTGAAGCTTG CAGTGCTAAT
CTTTTTCTTA AACTAAAAAA TCACTGGGTG ACACCAAAAC TTGATGGCTC TGGTATTGCA
GGTGTTAAAC GTCGACAAAT TATGGAATTA TCAGCCAAAG CGGGGCAGCC CATTAGGGAA
ATGAAGATAA CCATTAATGA TCTATTAAAT GCCCAAGCTG TCTGCTTAAG CAACGCATTA
ATGGGAATAG TACCTGTTAT TCAATACCAA TCCCATTGTT ACCCTGAATC CAGTCTTTTG
CATATACAAA AATTACAGTC ACTAGTAGAG AAAGGAGAGG TGTTTAATGC CGACTAA
 
Protein sequence
MLINGTESTT IAADDRGLAY GDGLFSTIKV ERGIVQLWDY HLQRLQLGAK KLFFPEVDWL 
LLSSELHYLA KTVAEQPFAV IKVMLTRGSG GRGYSIQGCS SPQRILSVHP YPVFYQQWQR
DGLKVIQCRQ KLAINRQLAG LKTLNRLEQI LIKHELEAQD AFEGIVCDND GHVIEACSAN
LFLKLKNHWV TPKLDGSGIA GVKRRQIMEL SAKAGQPIRE MKITINDLLN AQAVCLSNAL
MGIVPVIQYQ SHCYPESSLL HIQKLQSLVE KGEVFNAD