Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1092 |
Symbol | |
ID | 4625805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1362505 |
End bp | 1363341 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639796308 |
Product | aminotransferase, class IV |
Protein accession | YP_942530 |
Protein GI | 119944850 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0796265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAATAA ACGGCACTGA ATCTACAACA ATTGCAGCCG ATGACCGGGG TTTAGCCTAC GGAGATGGTC TATTTTCAAC CATAAAAGTT GAACGTGGTA TTGTGCAACT GTGGGATTAT CACCTGCAAA GGTTGCAATT GGGTGCAAAA AAGCTTTTTT TCCCTGAAGT TGATTGGTTA TTATTATCAA GCGAACTGCA CTATTTAGCA AAGACGGTTG CTGAGCAGCC TTTTGCTGTG ATTAAAGTAA TGCTAACACG AGGCTCCGGG GGACGGGGGT ATAGTATTCA AGGATGCAGT TCACCACAAC GTATCTTATC TGTCCATCCT TACCCGGTCT TTTATCAACA ATGGCAAAGG GATGGATTAA AGGTAATCCA ATGCAGGCAG AAATTAGCGA TTAATAGACA ATTAGCGGGT TTAAAAACAT TAAATCGTTT AGAGCAAATA TTGATAAAAC ATGAATTAGA AGCGCAAGAT GCCTTTGAGG GGATCGTTTG TGATAATGAT GGCCACGTTA TTGAAGCTTG CAGTGCTAAT CTTTTTCTTA AACTAAAAAA TCACTGGGTG ACACCAAAAC TTGATGGCTC TGGTATTGCA GGTGTTAAAC GTCGACAAAT TATGGAATTA TCAGCCAAAG CGGGGCAGCC CATTAGGGAA ATGAAGATAA CCATTAATGA TCTATTAAAT GCCCAAGCTG TCTGCTTAAG CAACGCATTA ATGGGAATAG TACCTGTTAT TCAATACCAA TCCCATTGTT ACCCTGAATC CAGTCTTTTG CATATACAAA AATTACAGTC ACTAGTAGAG AAAGGAGAGG TGTTTAATGC CGACTAA
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Protein sequence | MLINGTESTT IAADDRGLAY GDGLFSTIKV ERGIVQLWDY HLQRLQLGAK KLFFPEVDWL LLSSELHYLA KTVAEQPFAV IKVMLTRGSG GRGYSIQGCS SPQRILSVHP YPVFYQQWQR DGLKVIQCRQ KLAINRQLAG LKTLNRLEQI LIKHELEAQD AFEGIVCDND GHVIEACSAN LFLKLKNHWV TPKLDGSGIA GVKRRQIMEL SAKAGQPIRE MKITINDLLN AQAVCLSNAL MGIVPVIQYQ SHCYPESSLL HIQKLQSLVE KGEVFNAD
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