Gene Ping_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1089 
Symbol 
ID4625802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1359878 
End bp1360612 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content45% 
IMG OID639796305 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_942527 
Protein GI119944847 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.319271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGG AAGATAAAGT TGTATTAGTG ACGGGCGCGA GTCGTGGTAT TGGCCGCGCA 
ATTGCAGAGC ACTTTGCTGC ATTAGGTGCG ACTGTTTTAG GCACGGCAAC CAGTGAAAAT
GGCGCCAATG CGATCAGCGA CTATCTTGCT GAAACAGGCA AAGGTTTTGT TTTAAATGTG
ACCGATAATG ACTCAATTGC TGCACTGTTT AGTGATATTA AAAAACAATA TGGCGCGGTG
GATGTACTGG TGAATAATGC TGGGATCACG CGTGATAATT TATTAATGCG CATGAAAGAT
GATGAGTGGG ATGACATCAT AGGCACTAAC TTGACGCCTA TTTTTAAAAT GAGTAAAGCG
GCTATCCGTG CGATGATGAA AAAACGCCAG GGCCGTATTA TTAATGTTGG TTCAGTGGTG
GGTAGTATGG GCAATGCGGG ACAAACTAAT TACGCTGCGG CTAAAGCAGG TGTTATTGGT
TTTACTAAAT CGTTAGCGCG TGAAGTTGCA AGTCGCGGTA TTACGGTTAA TACTGTTGCA
CCGGGTTTTA TTGAAACGGA TATGACTAAA GCATTAACTG ATGAGCAACG CGCTGCGACC
TTATCTGCAG TGCCTGCTGG CCGTCTCGGA GATCCCAAAG AGATTGCAGC AACAGTTGCA
TTTTTAGCCT CGGATGGCGC AGCTTATATA AACGGTGAAA CCATTCATGT AAACGGTGGC
ATGTATATGG TCTAA
 
Protein sequence
MSMEDKVVLV TGASRGIGRA IAEHFAALGA TVLGTATSEN GANAISDYLA ETGKGFVLNV 
TDNDSIAALF SDIKKQYGAV DVLVNNAGIT RDNLLMRMKD DEWDDIIGTN LTPIFKMSKA
AIRAMMKKRQ GRIINVGSVV GSMGNAGQTN YAAAKAGVIG FTKSLAREVA SRGITVNTVA
PGFIETDMTK ALTDEQRAAT LSAVPAGRLG DPKEIAATVA FLASDGAAYI NGETIHVNGG
MYMV