Gene Ping_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1081 
Symbol 
ID4625375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1351655 
End bp1352248 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content35% 
IMG OID639796297 
Producthypothetical protein 
Protein accessionYP_942519 
Protein GI119944839 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3056] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000167601 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCACA CATGGTCTAA AAAAATCCGT TTTTTCACAT TAGTATCAGC GGCCTTTTTT 
TTATTTTCTT GCAGCAATGT CCCAAATACC ATTCAGATTC AACCTAAAAT TTCCACTGAA
AAAAATATAC CCGCGATTAA TAGCAATATC ACTTGGTCAC TGAGCAGTCA AGATCGACGT
ATTGCGCACT ATTTAATTGA AATAAGCGCA GGTGACGGCC TTGCAACACT GGTCAATGAA
TCAAACAGTA GTCGTCTGAT TATTCAGCAA ACTTTAAATG AACAATGGGT GGCTCAGGGA
TTAAACCTTT CTCCTAACAA TGATTACAAA ATAGATGTTC AGCTCATTAA ATTACTCGCA
AAAGTCAAAC AGTCCACCTA TAAGCATAAA ATAAATTCTG AGGTGGTTAT AAAAATCCAA
CTTAAATCGA ATAACAAAAC ATTCAGCAAA ACATTTAATT CACACACAGT GTCAGAAGCT
CCCCTTAATG CCGATGGTGT AAAAATAAGC GCACAACTTA ATAAGCAGTT ATCACTATTG
TTAACTGAAA TAGTGATAGA TCCAGAACTT AATACCAAGC TGCAAAAATT CTAA
 
Protein sequence
MIHTWSKKIR FFTLVSAAFF LFSCSNVPNT IQIQPKISTE KNIPAINSNI TWSLSSQDRR 
IAHYLIEISA GDGLATLVNE SNSSRLIIQQ TLNEQWVAQG LNLSPNNDYK IDVQLIKLLA
KVKQSTYKHK INSEVVIKIQ LKSNNKTFSK TFNSHTVSEA PLNADGVKIS AQLNKQLSLL
LTEIVIDPEL NTKLQKF