Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1071 |
Symbol | |
ID | 4625365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1345395 |
End bp | 1346123 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639796287 |
Product | chromosomal replication initiator, DnaA |
Protein accession | YP_942509 |
Protein GI | 119944829 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.163045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAGG ATGAATTACG TTTTCAATAT CCTTTATTAG CACTTAAATT TCCTGATGAT GAAACCTTTG CAAGTTTTTA TCCTGGTCAA AATTACAGTG TATTAACACA ATTAAAAAAT AGTGTTGTGG GTCTGGGTGA GCCGGTCTTA TATATGTGGG GAGAATCTGG TAGCGGTCGT TCTCATTTAT TACATGCTTT ATGTTCAGAA GTCGATGAGC GTGGCGACAG TGTTGCCTAT ATTCCACTGC GACATTACCA GAGTATGACG TTAGATATTT TTGAAAATAT GGAACAGGTA ACGCTTGTCT GCATCGATGA TATTGAGGAA ATCGCCGGTG ATGAAAAATG GGAAAAAGCA CTTTTTGATT TTTATAATCG CTGGTCCGAT AATAAAGAAA ATCGTTCATC GGGTGCCAGT TTAGTGTTTT GCGCAAATCA TTTACCTAAG CAACTTGGTC TAAAACTTAA TGATCTTGTT TCACGACTTG AATGGGGGGC TTGTTACCAT TTAACCCCGC TTAATGAAGA AGACAAGCTA GGTGCTCTGC AATTACGTGC TCAATTAAAG GGCATGAAGT TGCCTGTAGA TGTTGGGCGT TTTTTATTAA ATCGTCTATC ACGGGATATG AATACGTTAT TGGACACGCT TGATCAATTA GATAATGCAT CGCTAGAAGC TAAGCGTAAA TTAACGATTC CCTTTGTCAA AGAGGTATTA GTCTTATAA
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Protein sequence | MPQDELRFQY PLLALKFPDD ETFASFYPGQ NYSVLTQLKN SVVGLGEPVL YMWGESGSGR SHLLHALCSE VDERGDSVAY IPLRHYQSMT LDIFENMEQV TLVCIDDIEE IAGDEKWEKA LFDFYNRWSD NKENRSSGAS LVFCANHLPK QLGLKLNDLV SRLEWGACYH LTPLNEEDKL GALQLRAQLK GMKLPVDVGR FLLNRLSRDM NTLLDTLDQL DNASLEAKRK LTIPFVKEVL VL
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