Gene Ping_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1062 
Symbol 
ID4625990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1337246 
End bp1337866 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content39% 
IMG OID639796278 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_942500 
Protein GI119944820 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAT TTTTTTATGT ACACCCTGAA AATCCTCAAG TTCGCATGAT TAAGCAAGCG 
GTAGAGATAT TAAAAAAGGG TGGGGTGATT ATTTATCCAA CGGATTCCGG TTATGCATTA
GGTTGCACAA TGGACAATAA ACACGGTTTG GACAAAATCT GTCAAATTCG GGATTTAAAT
AAAAAACACA ACTTCACTTT GGTGTGCCGC GATCTATCTG AAATAGCGAC CTATGCACGT
GTGGATAATC ATGCCTTCCG TGCGCTTAAA AATAACACAC CAGGTGCCTA TACTTTTATT
TTCAAATCCA CTAAAGATTT GCCCAAACGT TTAATGAATC CGACTAAACG CACGATCGGT
ATTCGTATTC CCAATAATGT AATTGCACTG GCATTATTGG CTGAGTTAGG TGAGCCTTTA
ATGACCACAA GTTTGATTCT GCCTGGCAAT ACCAGCACTG AATTTGATCC TGAAGATATT
AAAGACAAAT TATCCAATCA AGTAGATTTA ATTATGACGG GTGGGTATTT AGGTGAATCG
CCAACCACTG TGATTGATTT TTCCGATGAT GATGTGGTTA TCACGCGGAT AGGTGCCGGG
GATATAACAC CCTTTCAATA A
 
Protein sequence
MSQFFYVHPE NPQVRMIKQA VEILKKGGVI IYPTDSGYAL GCTMDNKHGL DKICQIRDLN 
KKHNFTLVCR DLSEIATYAR VDNHAFRALK NNTPGAYTFI FKSTKDLPKR LMNPTKRTIG
IRIPNNVIAL ALLAELGEPL MTTSLILPGN TSTEFDPEDI KDKLSNQVDL IMTGGYLGES
PTTVIDFSDD DVVITRIGAG DITPFQ