| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1055 |
|---|
| Symbol | |
|---|
| ID | 4625983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1328926 |
|---|
| End bp | 1329738 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639796271 |
|---|
| Product | tryptophan synthase, alpha subunit |
|---|
| Protein accession | YP_942493 |
|---|
| Protein GI | 119944813 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC GTTATCAGGC TTTATTTGCC CGTCTTAAAA CTGAAAACCA GGGAGCCTTT
GTTCCTTTTG TGATGCTTAG TGATCCCAAT CGCGCCCTCT CCTTGAAAAT AATTGATACT
TTAATTGATG CCGGTGCAGA TGCTTTGGAG TTAGGGATCC CCTTTTCAGA TCCTGTCGCC
GATGGTATTG TTATTCAAGA TGCCTCTATT CGCGCTTTGA ATGCCGGTGG AACACCAGAC
AGCTGCCTGG AAATCATTGC GGAAATTCGT CATAAACATC CGACCATTCC CATTGGTCTA
TTATTGTATG TAAACCTTGT TTATCGTAAT GGTATTGAAA ATTTTTATGA ACGTTGTTCT
AAAGCGGGTG TCGATTCTAT ATTAATAGCA GATGCACCAC TTGAAGAAAG TGCGCCTTAC
CGCGCTGCGG CTGGAAAATT TGCCATTAAC CAAATATTTA TAGCGCCCCC TAATGGCGAT
CAGGAAACAT TACAAAAAGT GGCTGAATAT GGACAGGGTT ATACCTACTT GTTAAGCCGC
GCGGGGGTGA CCGGTGGACA TGCCAAGGCA GGTATGCCTA TTGGAAATAT GTTGACGACA
TTAAATAAAT ATCATGCGCC GCCGTCATTA CTGGGTTTTG GTATTTCCAC ACCTGAGCAG
GTACGTGAAG CAATAAAATT GGGAGCTGCT GGCGCAATTT CAGGTTCCGC TGTGGTTAAA
ATTATTGAAA AACACTTAGA TAACCCGGAT AAACTGCTTT CTGAAATGCA TAAATTTATC
AGTAAAATGA AAGCTGCCAC CGATAAAAAA TAA
|
|---|
| Protein sequence | MSKRYQALFA RLKTENQGAF VPFVMLSDPN RALSLKIIDT LIDAGADALE LGIPFSDPVA
DGIVIQDASI RALNAGGTPD SCLEIIAEIR HKHPTIPIGL LLYVNLVYRN GIENFYERCS
KAGVDSILIA DAPLEESAPY RAAAGKFAIN QIFIAPPNGD QETLQKVAEY GQGYTYLLSR
AGVTGGHAKA GMPIGNMLTT LNKYHAPPSL LGFGISTPEQ VREAIKLGAA GAISGSAVVK
IIEKHLDNPD KLLSEMHKFI SKMKAATDKK
|
|---|
| |