Gene Ping_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1045 
Symbol 
ID4623905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1318477 
End bp1318968 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content41% 
IMG OID639796261 
Productdihydrofolate reductase 
Protein accessionYP_942483 
Protein GI119944803 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.46602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT CAATGATTGT TGCGATGTCG GAGAATAGGG TAATTGGTTT GGATAATAAA 
ATGCCATGGC ATTTACCTGC CGATTTAATG TTTTTTAAAC GAGTCACATT AGGTAAACCC
ATTATTATGG GGCGGAAAAC CTTCGAGTCA ATCGGGCGGC CGTTACCTGG AAGAAAAAAC
ATAGTACTAA GCCGTGATAA AAATCTTCAC ATAGAGGGGG TTTGCTGCGT GCAAACTGTT
GAGCAGGCAC TCGCACTGGT GGAAGATTGT GATGAAGTCA TGGTGATCGG TGGAGCGACG
ATTTATGAGC AGTTTTTACC ACAAGCAAGC CGTTTATATA TTACTTTTAT CGATTTAAAA
ACAGCGGGTG ACACACACTT TCCCGATTAT AAAATGATTG CCGATTGGCG AGAAGTACAG
AAAGAAGCGC ATCAGAGCGA TGCGCAAAAC AGTTATAATT ATCAATTTAT AACATTGGAC
CGAGTAAGCT GA
 
Protein sequence
MKISMIVAMS ENRVIGLDNK MPWHLPADLM FFKRVTLGKP IIMGRKTFES IGRPLPGRKN 
IVLSRDKNLH IEGVCCVQTV EQALALVEDC DEVMVIGGAT IYEQFLPQAS RLYITFIDLK
TAGDTHFPDY KMIADWREVQ KEAHQSDAQN SYNYQFITLD RVS