Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1033 |
Symbol | |
ID | 4624176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1303737 |
End bp | 1304441 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796249 |
Product | transcriptional regulator, histidine utilization repressor, GntR family protein |
Protein accession | YP_942471 |
Protein GI | 119944791 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAT CACCACGTTA TATCCAAATC AGAGAATTTA TAAATGCAAA GATTAGCAGT AATGTCTGGC CGGTGGGCAG TAAAATCCCA ACTGAAATGG CATTAACTGA GCAATTTGGG GTCAGCCGTA TGACAGTCAA TAAAGCTATT CGAGATTTAG TGACGGCAGG GTTATTAAAA CGAACGGCAC GGGTTGGCAC TTTTGTTTGC CAGAATAAAA TGGAATCCCC ATTAATCGAT ATTCGTAATA TCGCCGATGA AATCCGCCAG CGTGGCAAGC AATACAGCAG TAAAGTCCTA ACTCAATTAA CCCTGCATGC CGATCCCCAA ACGGCAATAC GTTTAGGGGT ACCGATTGAT ACACCCATCT ACTTTAGTGA GATTGTCCAC TTAGAAGATA ACAGCCCACT ACAACTAGAA GTGCGCTGGG TAAACCCATC GTTTGTACCC GATTATATCA AACAGGATTT CAGCCATTCG ACCCCCAATG AATATCTAAC AAAAAATTGC CCGTTAAGCT CGATAGAGCA TACCGTTGAA GCTGTGATGG TTAATGAACG CATTCAGGAA TATTTGCACT TATCGACTAA CCAACCCTGC CTGCTTTTAA ACCGCAGAAC ATGGAGCAAA CAGGATTTGA TCAGTGTCGC CCTGCTTTAT CACCCGGCCG ACAAATATAA ATTGAGTTTA AAAACTAACC TTTAA
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Protein sequence | MSKSPRYIQI REFINAKISS NVWPVGSKIP TEMALTEQFG VSRMTVNKAI RDLVTAGLLK RTARVGTFVC QNKMESPLID IRNIADEIRQ RGKQYSSKVL TQLTLHADPQ TAIRLGVPID TPIYFSEIVH LEDNSPLQLE VRWVNPSFVP DYIKQDFSHS TPNEYLTKNC PLSSIEHTVE AVMVNERIQE YLHLSTNQPC LLLNRRTWSK QDLISVALLY HPADKYKLSL KTNL
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