Gene Ping_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1033 
Symbol 
ID4624176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1303737 
End bp1304441 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content42% 
IMG OID639796249 
Producttranscriptional regulator, histidine utilization repressor, GntR family protein 
Protein accessionYP_942471 
Protein GI119944791 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT CACCACGTTA TATCCAAATC AGAGAATTTA TAAATGCAAA GATTAGCAGT 
AATGTCTGGC CGGTGGGCAG TAAAATCCCA ACTGAAATGG CATTAACTGA GCAATTTGGG
GTCAGCCGTA TGACAGTCAA TAAAGCTATT CGAGATTTAG TGACGGCAGG GTTATTAAAA
CGAACGGCAC GGGTTGGCAC TTTTGTTTGC CAGAATAAAA TGGAATCCCC ATTAATCGAT
ATTCGTAATA TCGCCGATGA AATCCGCCAG CGTGGCAAGC AATACAGCAG TAAAGTCCTA
ACTCAATTAA CCCTGCATGC CGATCCCCAA ACGGCAATAC GTTTAGGGGT ACCGATTGAT
ACACCCATCT ACTTTAGTGA GATTGTCCAC TTAGAAGATA ACAGCCCACT ACAACTAGAA
GTGCGCTGGG TAAACCCATC GTTTGTACCC GATTATATCA AACAGGATTT CAGCCATTCG
ACCCCCAATG AATATCTAAC AAAAAATTGC CCGTTAAGCT CGATAGAGCA TACCGTTGAA
GCTGTGATGG TTAATGAACG CATTCAGGAA TATTTGCACT TATCGACTAA CCAACCCTGC
CTGCTTTTAA ACCGCAGAAC ATGGAGCAAA CAGGATTTGA TCAGTGTCGC CCTGCTTTAT
CACCCGGCCG ACAAATATAA ATTGAGTTTA AAAACTAACC TTTAA
 
Protein sequence
MSKSPRYIQI REFINAKISS NVWPVGSKIP TEMALTEQFG VSRMTVNKAI RDLVTAGLLK 
RTARVGTFVC QNKMESPLID IRNIADEIRQ RGKQYSSKVL TQLTLHADPQ TAIRLGVPID
TPIYFSEIVH LEDNSPLQLE VRWVNPSFVP DYIKQDFSHS TPNEYLTKNC PLSSIEHTVE
AVMVNERIQE YLHLSTNQPC LLLNRRTWSK QDLISVALLY HPADKYKLSL KTNL