Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1030 |
Symbol | |
ID | 4624173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1299488 |
End bp | 1301167 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639796246 |
Product | urocanate hydratase |
Protein accession | YP_942468 |
Protein GI | 119944788 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.235061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATA AGCGTTTAGA TACTTCGCGC ACTATTATTG CACCACAAGG TACAAAATTG AATGCTAAAT CTTGGCTAAC GGAAGCGCCC CTTAGAATGT TAATGAATAA TCTTCATCCT GACGTTGCTG AGCACCCGCA TGCCTTAGTT GTCTATGGTG GTATCGGCCG TGCTGCACGT GATTGGCAGT CCTATGACAA GATTGTCGAA GTACTGCAGC GTTTAGAAGA TGACGAAACC TTATTAGTCC AGTCAGGTAA ACCCGTCGGT GTTTTTCAAA CCCATAAAAA TGCGCCACGG GTACTGATTG CCAATTCGAA CCTCGTGCCC CATTGGGCAA ACTGGGAACA CTTCAATAAA CTCGATAAGC AGGGTTTGAT GATGTACGGA CAAATGACCG CGGGCTCTTG GATTTACATT GGCTCTCAGG GAATTGTGCA AGGTACTTAT GAGACTTTTG TGGCCATGGC GAAAAAACAT TTTTCCGGCA GCGCTAGCGG TCGCTGGATA TTAACTGGCG GCTTAGGCGG AATGGGGGGG GCACAACCCC TTGCTGCCAC GATGGCAGGC TTTTCAATGG TGGCCGTAGA ATGTGATGAA TCGCGTATTG ATTACCGTTT ACGGACAGGT TATGTGGATC AAAAAGCCAC TTCTTTGAAT CAGGCATTAA GACTGCTTGA ACAGGCAAAA GCGGATAATA AAACCACTTC AATTGCGCTG CTTGCCAATA CCGCGGATAT TTTTACCGAG CTGGTTAAAC GTCAAATAAC CCCCGATGTG GTCACTGACC AGACCTCGGC ACACGATCCC TTAAACGGTT ACCTGCCTCA GAACTGGACT ATGGAATACG TGGCAGAAAT GCGTAAAACC GATGAAGCTG CTGTTATTAA AGCCGCTAAA AAATCCATGG CAGTACAAGT TAAGGCGATG CTGGATCTCC AGTCTGCGGG CGCTGCAACC GTTGATTATG GGAATAATAT TCGGCAAATG GCCCTTGAGG AAGGAGTTAA AAATGCCTTT GATTTCCCGG GATTTGTACC GGCTTATATC CGTCCGCTAT TTTGTGAAGG TATTGGTCCT TTTCGCTGGG TTGCGCTGTC TGGCGATCCA GAAGATATTT ACAAAACAGA TCAGAAAGTA AAAGAGCTTA TTCCCAATAA TCCAGATCTG CACAACTGGC TGGATATGGC GCGGGAACAC ATCCAATTCC AAGGTCTGCC GGCACGTATT TGCTGGGTTG GTTTAAAAGA TCGTCAGCGT CTGGGACTGG CATTTAATGA AATGGTTAAA AATGGCGAAC TGAAAGCCCC TCTTGTTATT GGCCGTGATC ACCTTGATTC AGGCTCGGTC GCAAGCCCAA ACCGCGAGAC TGAAGACATG CTGGATGGTT CCGATGCGGT GTCAGACTGG CCATTATTAA ACGCGTTATT AAACACCGCC AGTGGTGCAA CATGGGTATC ACTGCATCAT GGTGGTGGTG TCGGTATGGG GTTTTCACAA CATTCGGGCA TGGTCGTGGT CTGTGATGGG ACAGATGATG CCCACCAGCG TATTAGCCGG GTATTAAGAA ACGATCCGGC CACAGGTGTA ATGCGTCATG CCGATGCGGG TTACGAGATC GCTAAAAAAT GTGCTCGCGA GCAGCACCTT GATTTGCCTA TGCTCGATAC CGAACAGTAA
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Protein sequence | MTDKRLDTSR TIIAPQGTKL NAKSWLTEAP LRMLMNNLHP DVAEHPHALV VYGGIGRAAR DWQSYDKIVE VLQRLEDDET LLVQSGKPVG VFQTHKNAPR VLIANSNLVP HWANWEHFNK LDKQGLMMYG QMTAGSWIYI GSQGIVQGTY ETFVAMAKKH FSGSASGRWI LTGGLGGMGG AQPLAATMAG FSMVAVECDE SRIDYRLRTG YVDQKATSLN QALRLLEQAK ADNKTTSIAL LANTADIFTE LVKRQITPDV VTDQTSAHDP LNGYLPQNWT MEYVAEMRKT DEAAVIKAAK KSMAVQVKAM LDLQSAGAAT VDYGNNIRQM ALEEGVKNAF DFPGFVPAYI RPLFCEGIGP FRWVALSGDP EDIYKTDQKV KELIPNNPDL HNWLDMAREH IQFQGLPARI CWVGLKDRQR LGLAFNEMVK NGELKAPLVI GRDHLDSGSV ASPNRETEDM LDGSDAVSDW PLLNALLNTA SGATWVSLHH GGGVGMGFSQ HSGMVVVCDG TDDAHQRISR VLRNDPATGV MRHADAGYEI AKKCAREQHL DLPMLDTEQ
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