Gene Ping_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1030 
Symbol 
ID4624173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1299488 
End bp1301167 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content48% 
IMG OID639796246 
Producturocanate hydratase 
Protein accessionYP_942468 
Protein GI119944788 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.235061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA AGCGTTTAGA TACTTCGCGC ACTATTATTG CACCACAAGG TACAAAATTG 
AATGCTAAAT CTTGGCTAAC GGAAGCGCCC CTTAGAATGT TAATGAATAA TCTTCATCCT
GACGTTGCTG AGCACCCGCA TGCCTTAGTT GTCTATGGTG GTATCGGCCG TGCTGCACGT
GATTGGCAGT CCTATGACAA GATTGTCGAA GTACTGCAGC GTTTAGAAGA TGACGAAACC
TTATTAGTCC AGTCAGGTAA ACCCGTCGGT GTTTTTCAAA CCCATAAAAA TGCGCCACGG
GTACTGATTG CCAATTCGAA CCTCGTGCCC CATTGGGCAA ACTGGGAACA CTTCAATAAA
CTCGATAAGC AGGGTTTGAT GATGTACGGA CAAATGACCG CGGGCTCTTG GATTTACATT
GGCTCTCAGG GAATTGTGCA AGGTACTTAT GAGACTTTTG TGGCCATGGC GAAAAAACAT
TTTTCCGGCA GCGCTAGCGG TCGCTGGATA TTAACTGGCG GCTTAGGCGG AATGGGGGGG
GCACAACCCC TTGCTGCCAC GATGGCAGGC TTTTCAATGG TGGCCGTAGA ATGTGATGAA
TCGCGTATTG ATTACCGTTT ACGGACAGGT TATGTGGATC AAAAAGCCAC TTCTTTGAAT
CAGGCATTAA GACTGCTTGA ACAGGCAAAA GCGGATAATA AAACCACTTC AATTGCGCTG
CTTGCCAATA CCGCGGATAT TTTTACCGAG CTGGTTAAAC GTCAAATAAC CCCCGATGTG
GTCACTGACC AGACCTCGGC ACACGATCCC TTAAACGGTT ACCTGCCTCA GAACTGGACT
ATGGAATACG TGGCAGAAAT GCGTAAAACC GATGAAGCTG CTGTTATTAA AGCCGCTAAA
AAATCCATGG CAGTACAAGT TAAGGCGATG CTGGATCTCC AGTCTGCGGG CGCTGCAACC
GTTGATTATG GGAATAATAT TCGGCAAATG GCCCTTGAGG AAGGAGTTAA AAATGCCTTT
GATTTCCCGG GATTTGTACC GGCTTATATC CGTCCGCTAT TTTGTGAAGG TATTGGTCCT
TTTCGCTGGG TTGCGCTGTC TGGCGATCCA GAAGATATTT ACAAAACAGA TCAGAAAGTA
AAAGAGCTTA TTCCCAATAA TCCAGATCTG CACAACTGGC TGGATATGGC GCGGGAACAC
ATCCAATTCC AAGGTCTGCC GGCACGTATT TGCTGGGTTG GTTTAAAAGA TCGTCAGCGT
CTGGGACTGG CATTTAATGA AATGGTTAAA AATGGCGAAC TGAAAGCCCC TCTTGTTATT
GGCCGTGATC ACCTTGATTC AGGCTCGGTC GCAAGCCCAA ACCGCGAGAC TGAAGACATG
CTGGATGGTT CCGATGCGGT GTCAGACTGG CCATTATTAA ACGCGTTATT AAACACCGCC
AGTGGTGCAA CATGGGTATC ACTGCATCAT GGTGGTGGTG TCGGTATGGG GTTTTCACAA
CATTCGGGCA TGGTCGTGGT CTGTGATGGG ACAGATGATG CCCACCAGCG TATTAGCCGG
GTATTAAGAA ACGATCCGGC CACAGGTGTA ATGCGTCATG CCGATGCGGG TTACGAGATC
GCTAAAAAAT GTGCTCGCGA GCAGCACCTT GATTTGCCTA TGCTCGATAC CGAACAGTAA
 
Protein sequence
MTDKRLDTSR TIIAPQGTKL NAKSWLTEAP LRMLMNNLHP DVAEHPHALV VYGGIGRAAR 
DWQSYDKIVE VLQRLEDDET LLVQSGKPVG VFQTHKNAPR VLIANSNLVP HWANWEHFNK
LDKQGLMMYG QMTAGSWIYI GSQGIVQGTY ETFVAMAKKH FSGSASGRWI LTGGLGGMGG
AQPLAATMAG FSMVAVECDE SRIDYRLRTG YVDQKATSLN QALRLLEQAK ADNKTTSIAL
LANTADIFTE LVKRQITPDV VTDQTSAHDP LNGYLPQNWT MEYVAEMRKT DEAAVIKAAK
KSMAVQVKAM LDLQSAGAAT VDYGNNIRQM ALEEGVKNAF DFPGFVPAYI RPLFCEGIGP
FRWVALSGDP EDIYKTDQKV KELIPNNPDL HNWLDMAREH IQFQGLPARI CWVGLKDRQR
LGLAFNEMVK NGELKAPLVI GRDHLDSGSV ASPNRETEDM LDGSDAVSDW PLLNALLNTA
SGATWVSLHH GGGVGMGFSQ HSGMVVVCDG TDDAHQRISR VLRNDPATGV MRHADAGYEI
AKKCAREQHL DLPMLDTEQ