Gene Ping_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1028 
Symbol 
ID4624171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1297140 
End bp1297730 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID639796244 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_942466 
Protein GI119944786 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.384494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTA AATTGATACT CTTTATTTTA AGCAGTTGTC TGTTGTACAG TGCCAATGCA 
CTGGCAGATA AAGCTGTCCT GGCCGGAGGA TGTTTTTGGT GCATGGAAGC AGACTTTGAA
AAACTTGAAG GGGTGAATGA TGTCGTCTCA GGTTTTACCG GCGGGAAATT AAAAAACCCA
ACCTATAACG GTAATCACCA GGGGCACTAT GAAGCAGTGG AAATCACCTA TGATGCGGAT
AAAATAAGTT ACCAGGCACT GCTGGATCAT TATTGGGTCA ATATCGACCC CTTTGACGAG
CGAGGGCAGT TTTGCGATAA AGGGCCAAGT TACCTCAGTG CTATTTTTGT TGCCAATGAA
CAGCAAAGGA AAACAGCAGA ACAATCTAAA GCGTTGATAG CAGAGCAGTT TCTCGATCAA
ACCATTGTTA CGCCCATTTT ACCGGCAGCG GTTTTTTATC CGATTAAAGG TAACGAGAGT
TATCATCAGA ACTATGCTGA AAACAACCCG ATTCGTTATA AGGCTTATCG TTGGAATTGC
GGGCGGGATA AACGTCTCAA GGAAATTTGG GGCGAGAAGG TGACTCACTG A
 
Protein sequence
MKSKLILFIL SSCLLYSANA LADKAVLAGG CFWCMEADFE KLEGVNDVVS GFTGGKLKNP 
TYNGNHQGHY EAVEITYDAD KISYQALLDH YWVNIDPFDE RGQFCDKGPS YLSAIFVANE
QQRKTAEQSK ALIAEQFLDQ TIVTPILPAA VFYPIKGNES YHQNYAENNP IRYKAYRWNC
GRDKRLKEIW GEKVTH