Gene Ping_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1023 
Symbol 
ID4624166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1288810 
End bp1289142 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content41% 
IMG OID639796239 
Productnitrite reductase (NAD(P)H), small subunit 
Protein accessionYP_942461 
Protein GI119944781 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT GGTTTAATAT TTGTAAGTAT GAAGATCTTG CTCCTAACAG CGGCATTTGT 
GCCCAGTTTG AAAGTCAGCA AGTCGCGATT TTTTTCTGTC AACGTAACCA GGATTTATAT
GCAGTTTCAA ACTTTGATCC AATATCACAG GCGAATGTTA TTTCGCGCGG AATAATAGGG
TCAACGCAGG GAGAAACCTA TGTTGCATCA CCTTTGTATA AACAGCGTTT TAATTTAAAA
ACCGGCGTCT GCTTAGATTT ACCTGAGCAT ATCTTAAAAA CCTATGCAGT GCGCATTGAA
GCCGATCACG TACAACTGCA AGCGACAGCT TAA
 
Protein sequence
MSQWFNICKY EDLAPNSGIC AQFESQQVAI FFCQRNQDLY AVSNFDPISQ ANVISRGIIG 
STQGETYVAS PLYKQRFNLK TGVCLDLPEH ILKTYAVRIE ADHVQLQATA