Gene Ping_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1022 
Symbol 
ID4624165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1287267 
End bp1288736 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content45% 
IMG OID639796238 
Productnitrite transporter 
Protein accessionYP_942460 
Protein GI119944780 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00886] nitrite extrusion protein (nitrite facilitator) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAA CTTCATTTAA TATATTATCT TTTACTGGAA AGATGAAAAT TCTGCATTTA 
AGCTGGATGG CTTTTTTTAT TACTTTTGTT GTCTGGTTTA ACTTCGCCCC CCTGCTGCTT
GCGGTAAAAG AATCCTTGGG TTTAAGCACC GAAGAGATAA AAACCCTCTT AATTCTTAAC
GTCGCCTTAA CTATCCCGGC CCGAGTGATT GTCGGTTCAT TAACCGACAA ATACGGGCCA
AGAGTGGTGT ACTCTGCACT GCTGGCGGTT TGTTCTATTC CTTGTTTTAT GTTTGCTTTT
TCAGATACAT TTTTAGAAGC GGCGATCGCC CGTTTTCTGC TGGGTTTTAT CGGTGCAGGT
TTTGTCATTG GTATCCGCCT GGTGTCTGAA TGGTTTCCAC ATAACGAACT TGGCACCGCT
GAGGGGATCT ACGGCGGTTG GGGTAACTTC GGCAGTGCCG CGGCAGCCTT TAGTTTACCA
ACTCTGGCAT TACTGTTTGG CGGTGAAGAC GGATGGCGCT ATGCAACGGC CATCACAGGT
CTTATGAGTT TAGTTTTTGC TTTTGTATTT TATGCTAAGG TTAGCGATAC CCCAAAAGGC
TCGACCTATT TTAAACCGGC CAATTTAACG GCCATGGAAG TGACCTCTAA GGGCGATTTT
TTCCTATTAT TATTAATGAA AATTCCGATG TACGCAGCTC TGGCGTTACT TGCATGGAAA
GTCTCTCCAA GCAATATTGC GATGATTTCA GCTGAAGTGA CTTATCTTAT TTACGCCACA
CTGATTGCGC TTTATATTTA TGAATTATCA CAGGTTTGGA AGGTCAATAA ATCAATTTTC
ACGACACCAG TCCCTGAAAT TCATCAGTAT AAATTCAAAC AAGTTGCTGT GCTAAATGTC
CTTTATTTTG CAACCTTTGG ATCTGAGCTT GCCGTGATTT CAATGTTACC CTTGTTCTTT
TCTGAAACCT TTGAATTAAC CCCGGTAATG GCGGGTATGG TGGCATCAGC TTATGCCTTT
ATGAACTTAG TGTCCCGCCC TGGTGGCGGC TGGATTTCCG ATAAATGCGG GCGTAAAATC
ACTCTGGTGA TTCTTACCGC GGGACTGGCC TTGGGTTATC TGTTAATGGC ACAAATTACC
AGCGGCTGGA CGCTGTGGAT TGCAGTTGCA GCGGCGATGT TATGTTCTTT CTTTGTGCAG
GCCGGTGAAG GTGCCGTATT TGCCACCGTA CCGCTGATTA AACGCAGAAT GACCGGACAG
ATTGCCGGTA TGACCGGGGC TTACGGTAAC GTTGGAGCAG TGGTCTACTT AACGATACTG
TCCTTTGTTG ATTACCAAAC GTTCTTCTAC GTGATTGCCG TGACTGCGTT TTGTGGTTTG
GTGACTTTAT CTCTGATGGC TGAGCCCAAG GGACAAATGG CCGAGCTTAA TCCCGATGGC
AGTGTCACTA TGATTGATGT TAGCCACTAA
 
Protein sequence
MDRTSFNILS FTGKMKILHL SWMAFFITFV VWFNFAPLLL AVKESLGLST EEIKTLLILN 
VALTIPARVI VGSLTDKYGP RVVYSALLAV CSIPCFMFAF SDTFLEAAIA RFLLGFIGAG
FVIGIRLVSE WFPHNELGTA EGIYGGWGNF GSAAAAFSLP TLALLFGGED GWRYATAITG
LMSLVFAFVF YAKVSDTPKG STYFKPANLT AMEVTSKGDF FLLLLMKIPM YAALALLAWK
VSPSNIAMIS AEVTYLIYAT LIALYIYELS QVWKVNKSIF TTPVPEIHQY KFKQVAVLNV
LYFATFGSEL AVISMLPLFF SETFELTPVM AGMVASAYAF MNLVSRPGGG WISDKCGRKI
TLVILTAGLA LGYLLMAQIT SGWTLWIAVA AAMLCSFFVQ AGEGAVFATV PLIKRRMTGQ
IAGMTGAYGN VGAVVYLTIL SFVDYQTFFY VIAVTAFCGL VTLSLMAEPK GQMAELNPDG
SVTMIDVSH