| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1007 |
|---|
| Symbol | |
|---|
| ID | 4626260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1263085 |
|---|
| End bp | 1267686 |
|---|
| Gene Length | 4602 bp |
|---|
| Protein Length | 1533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639796223 |
|---|
| Product | glutamate synthase (ferredoxin) |
|---|
| Protein accession | YP_942445 |
|---|
| Protein GI | 119944765 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.465703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA TAGAGCAAAA CGCTCAAGGC CTTTATGTGC CAGAGATGGA ACATGATGCC
TGTGGTATAG GCTTTGTTGC ACACTTGAAA AACAGCAAGT CACATGCAAT TGTTACCCAA
GCTTTAGACA TGCTTGCACG TATGGAGCAC CGGGGTGGAC AAGGGTGTGA TCCCTGCAGT
GGTGATGGTG CCGGTATTCT TTTACAAAAA CCGCATGAGT TTTTAGTAAC TGAAGCGTTA
AAAATGGGTA TTACTTTACC AAAATTCGAC CAATATGGCG TGGGTACAAT CCTCTTTCCA
AAAGAGATTA ACCAACGTAA AGAATGTCGT GAAATATTAG AACGAAATGT GCAGCGTTTA
GGTCTTGAAC TTATCGGCTA CCGTGTCCTT CCGACCGATA ATTCAATGAT TGGTGAAGAT
CCATTAAGCA CGGAACCACA GTTCGAACAT ATGTTTGTAA CGGGGGGACC TGATATGGAC
CCCGCTGTAT TGGAACGTAA ATTATTTATC CTGCGTAATT ATTCAACACG CATCTGTTTG
CAGTCAGTTG ATGAGATCGG TGATAATTTT TACATTAATA CATTCTCTTA CAAAACAATT
GTTTACAAAG GTCAGTTAAC CACCGAGCAA GTACCTCAGT ATTTCCTTGA TTTGCAAAAC
CCAAGCATGG TGACCGCGCT TGCACTTGTA CATTCTCGTT TCTCAACTAA TACCTTCCCG
CGCTGGCGTT TAGCGCAGCC TTTCCGTTAT ATTGCGCATA ATGGTGAAAT TAATACCGTA
CGCGGTAATA TTAACTGGAT GAAAGCCCGT GAAGCTTTGC TGCAAGCAGA GTTTTTTACA
CGTTCAGAAC TAGATATGTT AATGCCAATC TGTACCGATG GCATGTCTGA CTCTGCAAGT
TTTGATATGG CCTTAGAATT ATTAGTGCTT TCCGGTCGTA GCCTGCCACA CGCATTAATG
ATGATGATCC CTGAAGCTTG GCAAGAAAAT AAGACGATGG ATCCTTCTCG TCGTGCATTC
TACCAATATC ATGCAAACTT AATGGAACCT TGGGATGGCC CAGCTTCTGT TTGTTTTACC
GATGGTGTGC AAGTGGGTGC GACGCTGGAT CGAAACGGTC TACGCCCTTC ACGTTATTGT
GTGACTAAAG ATGATTTCTT AATCATGGCA TCGGAAACCG GTGTGGTTGA TATTCCACCT
GAAAATATTA AACTTCGTGG TCGTCTGCAA CCAGGCCGTA TTTTTGTAGC GGATCTTAAA
CAGGGCCGAA TCATCTCCGA TGATGAAATA AAAGACAGTA TCGCAGCAAG ACAGCCCTAT
GAAACCTGGT TAGCGGATAA CCTGGTTAAG TTGGAAAACC AGCCGGCAGC ATTAGAGCGT
AATCTTCAGC CTGAAGATGG TCACTTATTG CGCCGTCTAC AAGGTTTTGG TGTGACCTCG
GAAGAGATGA ATGAGATTGT ATTGCCGATG ATGCGTGATG GTAAAGAGCC ATTGGGCGCT
ATGGGTGTCG ATTGGCCACT GGCTGTCCTT TCCCATCAAG CTCAGCATTT ATCTCATTAC
TTTAAGCAGT TGTTCGCACA GGTAACCAAC CCGCCAATCG ATCCGATTCG TGAGCGTATG
GTTATGTCGC TAAAAACTTA CTTAGGTAAA GATCAAAATT TATTATCGGA AACACCTGAG
CATTGTCATA AAGTCGAGCT TGAGTCTCCG GTATTAAGTA ATGCCGAACT GCAAAAAATC
AATGCGTTAG ATGATAAAAA CCTGCAGGCT AAAACATTAG ATACATTATT TAGAGCAACG
GGTGAGCCGG GCAAGTTAGC CAGATCATTA GATCGTATTT GCCGCTATGC GGAAGATGCG
ATTCATGATG GTTATTCGAT CATTATTCTG TCAGATCGCA GTGCGACCTC TGACCACGCT
CCTATTCCTG CGATGTTAGT AACGGCTGCG GTACATCATT ATCTGATTAA ACGCGGCCTG
CGTGCGCTTT GTGATATCGT CGTTGAAACC GGCGATGTAC GTGAAACTCA TCATTTTGCA
ACTGTGATAG GTTACGGAGC ATCAGCGGTT AACGCTTACT TAATTGAAGA AATGATTGTT
GACCTGCAGG TGAAAAAACG ATTACCTGCA GATAAAAAGG TCTCAGAACT TTTTGCTTCA
TATAAAGAGG CAATTGACTC CGGCCTGCTG AAAATATTTT CTAAAATGGG TATTTCAACC
ATTCAATCCT ACCAAGGTGC GCAAATATTT GAAGCACTGG GTATCAGTAA ATCGGTTGTT
GAAAGTTACT TCAAAGGCAC TGTGACACGT ATTCAAGGTT TATCAATTGA TGATATTGCA
ACTGAAATTC TAGTGCGTCA TCGTTTTGCT TACCCGCTAC GTGAAGTACC CGTCAACCGT
TTAGATGTAG GTGGTATTTA CCAATGGAAA CAGCGTGGTG AAAAACATTT ATTTAACCCG
ACGACTATCC CTTTATTACA AAATTCAACG CGTAACAAAA ATTATGCGGA GTTTAAAGAA
TATTGTGCCG CTGTTGACGC GCAGGGTGAT AATGCAGCAA CATTACGCAG TCAGTTTGAA
TTTGTACCTA ATGCAACGGG GCCTATCGCG CTCGATCAGG TTCAATCATC TGAAAGTATT
CTAAAACGTT TTGCAACCGG CGCGATGAGC TTTGGTTCTA TTTCTCATGA AGCCCACTCA
ACGCTGGCGA TTGCAATGAA CCGAATTGGG GCAAAATCCA ACACCGGTGA AGGTGGTGAA
GATCCAATGC GTTTTCTACC AAAAGAAAAT GGGGATTGGG AACGTTCTGC GATTAAACAG
GTGGCATCGG GTCGTTTTGG TGTGACCTCA TACTATCTGA CTAATGCCGA TGAAATTCAG
ATTAAGATGG CACAGGGAGC TAAACCAGGT GAAGGTGGTC AATTGCCGGG CCATAAAGTG
GATGACTGGA TTGGTCGTAC CCGTCACTCG ACACCGGGTG TTGGTTTGAT TTCTCCTCCA
CCGCATCACG ATATCTATTC AATCGAAGAT TTAGCACAGC TTATTTTCGA TTTGAAAAAT
GCTAACCGTA AAGCGCGTGT GAATGTCAAA CTGGTATCAG AAGCGGGTGT GGGCACCATT
GCCTCAGGTG TTTGTAAAGC GAAAGCAGAC GTTGTTTTAA TCGCTGGTTT TGACGGTGGT
ACAGGCGCAT CGCCACTATC ATCTATCCGC CATACGGGTT TACCATGGGA GCTTGGTCTA
GCTGAAACGC ACCAAACCCT GCTTAAAAAT GGTTTGCGTA ACCGTATTGT AGTGCAGGCC
GATGGGCAGA TGAAAACGCC TCGTGACTTA ACTATTGCTA CATTACTCGG CGCGGAAGAA
TGGGGCGTTG CAACCGCAGC ACTGGTTGTT GAAGGTTGTA TTATGATGCG TAAGTGTCAT
TTAAATACTT GTCCTGTAGG TATCGCGACA CAAAATAAAA CACTGCGAGA GCGTTTTGAC
GGTCGTGTTG AAGATGTTGT TACTTTCTTC CAATATCTGG TCGAGGGAAT GCGTGAAAAT
ATGGCGATGT TGGGTTATGC GACTATCAAT GAGATGGTTG GACAAACACA AAACCTGAAA
GTGCGTGACA ATATTAAACA TTGGAAATAC AAAAATTTAG ATTTAAGCAC TATTTTATTT
AAAGAACCTG CTCAGGAAGC TGATGGTCTG TTTAATCAGA CGGGTCAAAT GCATAATCTT
GAAAATGTGT TAGATAGAGA GTTAATTAAG CTTGCCAAAC CTGCGCTTGA AAAAGGTGAA
GCCGTTAGTG CTGAGTTTAT TCTCAAAAAC ACGGATCGCA GTTGCGGTAC GATGCTTTCT
AACGAAATAT CAAAAGTGTA CGGCGAACAG GGTTTACCAA AACCTATGCA GGTTAAATTT
ACCGGTTCTG CCGGACAATC TTTTGGTTGT TTTCTGGCAA AAGGTGTTGA GTTTACCGTT
GAGGGTGATG CAAATGATTA CTGGGGCAAA GGTTTGTCCG GTGGTCAAAT TGTCGTTTAT
CCATTCCGTA ACTCAACGAT TGTTGCTAAA GATAATATTA TCATCGGTAA CGTTTGTTTC
TATGGTGCGA CCTCTGGCGA GTCATACATT AATGGCATGG CAGGTGAACG TTTCTGTGTG
CGTAACTCCG GTGCACAAGT AGTTGTTGAA GGTATTGGTG ATCACGGTTG TGAATATATG
ACTGGCGGTA TCGCTATTGT TCTGGGTGTC ACTGGACGTA ACTTCGCCGC AGGTATGAGT
GGTGGTGTGG CTTATGTTTG GGATCGTGAG CAGTGCTTTG AAAGCAATTG TAATATGGAA
CTGGTGGATA TTGATCCGCT CGAGGAAGAA GATAAAGCGC TGATACTTGC TAAAGTGACT
AAACATTTAG AATTAACTGA ATCAAACGTT GCTCAAGAAT TTTTAGCTGA TCCTGAAGCA
AGCCTGAGTC AAATCAAAAA AGTGATGCCG CGTGATTACA AAGCGGTTTT GCTGGCGAAA
AAAAATAAAG GCCTTCAGCT TGCAAAAGAG AGCATCTCGA ACAGCGAGAA ACAAGCGGCT
AAAGCAACAA CTCTTGATGC ATGCAAGATA GGAGACGTAT AA
|
|---|
| Protein sequence | MTDIEQNAQG LYVPEMEHDA CGIGFVAHLK NSKSHAIVTQ ALDMLARMEH RGGQGCDPCS
GDGAGILLQK PHEFLVTEAL KMGITLPKFD QYGVGTILFP KEINQRKECR EILERNVQRL
GLELIGYRVL PTDNSMIGED PLSTEPQFEH MFVTGGPDMD PAVLERKLFI LRNYSTRICL
QSVDEIGDNF YINTFSYKTI VYKGQLTTEQ VPQYFLDLQN PSMVTALALV HSRFSTNTFP
RWRLAQPFRY IAHNGEINTV RGNINWMKAR EALLQAEFFT RSELDMLMPI CTDGMSDSAS
FDMALELLVL SGRSLPHALM MMIPEAWQEN KTMDPSRRAF YQYHANLMEP WDGPASVCFT
DGVQVGATLD RNGLRPSRYC VTKDDFLIMA SETGVVDIPP ENIKLRGRLQ PGRIFVADLK
QGRIISDDEI KDSIAARQPY ETWLADNLVK LENQPAALER NLQPEDGHLL RRLQGFGVTS
EEMNEIVLPM MRDGKEPLGA MGVDWPLAVL SHQAQHLSHY FKQLFAQVTN PPIDPIRERM
VMSLKTYLGK DQNLLSETPE HCHKVELESP VLSNAELQKI NALDDKNLQA KTLDTLFRAT
GEPGKLARSL DRICRYAEDA IHDGYSIIIL SDRSATSDHA PIPAMLVTAA VHHYLIKRGL
RALCDIVVET GDVRETHHFA TVIGYGASAV NAYLIEEMIV DLQVKKRLPA DKKVSELFAS
YKEAIDSGLL KIFSKMGIST IQSYQGAQIF EALGISKSVV ESYFKGTVTR IQGLSIDDIA
TEILVRHRFA YPLREVPVNR LDVGGIYQWK QRGEKHLFNP TTIPLLQNST RNKNYAEFKE
YCAAVDAQGD NAATLRSQFE FVPNATGPIA LDQVQSSESI LKRFATGAMS FGSISHEAHS
TLAIAMNRIG AKSNTGEGGE DPMRFLPKEN GDWERSAIKQ VASGRFGVTS YYLTNADEIQ
IKMAQGAKPG EGGQLPGHKV DDWIGRTRHS TPGVGLISPP PHHDIYSIED LAQLIFDLKN
ANRKARVNVK LVSEAGVGTI ASGVCKAKAD VVLIAGFDGG TGASPLSSIR HTGLPWELGL
AETHQTLLKN GLRNRIVVQA DGQMKTPRDL TIATLLGAEE WGVATAALVV EGCIMMRKCH
LNTCPVGIAT QNKTLRERFD GRVEDVVTFF QYLVEGMREN MAMLGYATIN EMVGQTQNLK
VRDNIKHWKY KNLDLSTILF KEPAQEADGL FNQTGQMHNL ENVLDRELIK LAKPALEKGE
AVSAEFILKN TDRSCGTMLS NEISKVYGEQ GLPKPMQVKF TGSAGQSFGC FLAKGVEFTV
EGDANDYWGK GLSGGQIVVY PFRNSTIVAK DNIIIGNVCF YGATSGESYI NGMAGERFCV
RNSGAQVVVE GIGDHGCEYM TGGIAIVLGV TGRNFAAGMS GGVAYVWDRE QCFESNCNME
LVDIDPLEEE DKALILAKVT KHLELTESNV AQEFLADPEA SLSQIKKVMP RDYKAVLLAK
KNKGLQLAKE SISNSEKQAA KATTLDACKI GDV
|
|---|
| |