| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1000 |
|---|
| Symbol | |
|---|
| ID | 4626253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1256765 |
|---|
| End bp | 1257487 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639796216 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_942438 |
|---|
| Protein GI | 119944758 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA TCTTAATTAC AGGCGCCACC TCCGGCATTG GTAAAGCCTT GTGTTTGCTT
TATCAGAAGC AAGGTTATGC CGTTATTGCC TGTGGTCGTA ATCAACAAGC CTTAGATGAA
CTGCGTAGTT TAAAAAATGT GTCAACATTA AGCTTTGATA TCAGTGACAA AGAGCAAGTC
GAAGAGGCTC TGAGAACACT GCCTGAGTTA GACATGGTTA TTTTAAATGC GGGTAGTTGC
GAATATATCG ATAATGCCAA AAATTTTGAC GGGGATCTCT TTGCACGCGT TATTACCACC
AATTTAATCG CTTTGGGCTA TTGCTTACAG AGTGTGTTAC CGAAAATAAA AAAAGGCGGA
CAACTCGCTT TAATGGGCTC AAGCGCAATT TATTTACCTT TTTCTCGGGC AGAAGCCTAC
GGGGCGAGTA AAGCGGGGGT TGCTTATTTA GCTAAAACCT TGGCGATCGA CCTTATTGAT
GATCAGATCA GTGTTTGTTT GATTAATCCC GGTTTTGTGA AAACGCCTTT AACGGATAAA
AATGCTTTTT CTATGCCTAT GCTGATAACA GCTGATAAGG CTGCTGACTA TATTTTTAAA
GGGTTGCTTA AAGGTAAAAA AGAAATACAT TTTCCTGCTT TTTTTACCTT TACGCTGAAA
ATATTAGCCT TCTTTCCGGA CGCCGTTTGG TTTTTTATTG CGACAAGGAT GATTAATAAA
TGA
|
|---|
| Protein sequence | MKRILITGAT SGIGKALCLL YQKQGYAVIA CGRNQQALDE LRSLKNVSTL SFDISDKEQV
EEALRTLPEL DMVILNAGSC EYIDNAKNFD GDLFARVITT NLIALGYCLQ SVLPKIKKGG
QLALMGSSAI YLPFSRAEAY GASKAGVAYL AKTLAIDLID DQISVCLINP GFVKTPLTDK
NAFSMPMLIT ADKAADYIFK GLLKGKKEIH FPAFFTFTLK ILAFFPDAVW FFIATRMINK
|
|---|
| |