Gene Ping_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0994 
Symbol 
ID4626583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1252014 
End bp1252562 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content40% 
IMG OID639796210 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_942432 
Protein GI119944752 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.336147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.798331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAG CTTTATTTCC ACTGCCTGTT TTTTTACTGC CCGAAGGGTT AACAAGGTTA 
CGTATTTTTG AACCACGTTA TAAGAGGCTA GTAGCAGAGG CTATGTCAAC GGGGCAAGGT
TTTGGATTAT GCCTGCCGAA GGAAGGGCAT AATCTCTATG ATATAGGCAT TCGCGTTGAA
ATATATAATT TTGATCAGGA CGAAAATGGT TTTTTAATTA TTGATATCAA AGGCACTGAT
AGATTTACAT TTGACGATGT AAGCTCAGAT TCTGACGGTT TAAGGCATGC TGATGTAACT
CTGATAGATG GATGGGAAAG CATTCAAATG ACGCCTCAAT ATGAGTTTAT GCTGGCCCCC
TTAAAAGCCG TTTTAACGTC TATACCTTTA CATGTGGAAC AAGTTAATCA ACAAGGCTTT
AATAATTTGA GCTGGATTTG TCAGCGTTGG TTAGAAATAT TACCTGTGCC TGCCGATAAA
AAATACTGGC TTGCTCGGCA AAGCGGCCCA GAGCCTACTG TTGAGTTTAT CCGTGAAGTA
ATTCAGTAG
 
Protein sequence
MRLALFPLPV FLLPEGLTRL RIFEPRYKRL VAEAMSTGQG FGLCLPKEGH NLYDIGIRVE 
IYNFDQDENG FLIIDIKGTD RFTFDDVSSD SDGLRHADVT LIDGWESIQM TPQYEFMLAP
LKAVLTSIPL HVEQVNQQGF NNLSWICQRW LEILPVPADK KYWLARQSGP EPTVEFIREV
IQ