Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0987 |
Symbol | |
ID | 4626576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1246048 |
End bp | 1247463 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639796204 |
Product | sensor histidine kinase |
Protein accession | YP_942426 |
Protein GI | 119944746 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000915173 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.356896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAA CCCTTTTCCG TAAGTTATTT ATCTCGTTGT TGCTGATTAG CTCTATCATG ATGGTCGGCA TGGCGCTGCT TATTAATAAT AGTTTTCAAA CCGGATTACA GAACTACCTT AACCACCGGG AAACAGAAGA AATGCAGGTT ATTGCTGAAA AAATCAGCCA ATATTACTCG CCTGAAAATG GCTGGAGAAT GATTGAAGAA CAGCCCTATT TATGGACCAA TCTTTTAAGA AAAGTAGGAA ATCATCCTGC CAGAGAAAGA GCTAATTCGC ATAGAGATCG TCCTCCTCAA GAACAATTTT TAATAAACCC GCGCATTTTT CTATTAAATG TACAGGGGGA AGCGGTGCTG GATCGCGCCA GAAAAATGAA AGAGCGCAAT GAAAGAGATC AGTTTATTAA AGTGCCCATT ATATTGGATG AACAAAATAT TGGCTGGATT GCGATTATAC AAAAAGAGAT TATCACGGGA AAATTAACCA AAATTTTCTT TAAACAGCAA TTAAATAATT TTTACTGGAT TGCCGCCTGG GCGGCGCTGT TTTCTTTTGT GGTTGCAGCT TTATTAGTGC GACATTTTCT TCAGCCTTTA AAGAATCTTG GCCTTAGTGT AAAGGCCTTA CAAAGGGGGG ATTTTAATTA TCAAATCCCG GTGAAGGGAC AGGATGAGTT AGCTGAATTA TCAAAAACTT TTAATCATTT AACCAATACG CTTAAGCTGC AAAAAGTCTC TAGAGAGCAA TGGATTGCGG ATATCTCCCA TGAATTACGC ACACCTATTG CCGTTTTAGT CAGTGAAATA GAAGCTATTG AGGATGGTAT TCGCAAACCT GAGCCTAAAT ATATTAAATC ATTACATGAG CAGGTAATGA ATCTCAGTCG CCTTGTTGAT GATCTTTATC AATTATCACT TTCTGATGCA GGTGTGCTGA CTAAAAATAC AGAGCGGGTA AATTTAACCC GGTTGTTAGA TAATATTGCA AATCAGAATG AATTACGATT AGCTGAAAAA AATATCCACC TGCAGCGTTG TTACGATTCC AGTAAAGCCA CTCTGTTGCA GGCTGATCCT AACGCACTAT CGCAGCTCAT TTTAAATCTT TTTGAAAATA GTTATCGTTA TACTGACCCG GATGGACAGC TTAAGCTTAC TTTGTCGCAG CGCCTCAATA GGGTTGAATT GATTATCGAA GACAGTGCAC CCGCCGTGCC CGATGATGCT CTGCCAAAAC TCTTCGAGCG TTTATTTCGC GTTGATAAAT CACGCAGCAG AGCCAATGGA GGCTCTGGTT TAGGTTTATC TATTTGCCAA AATATTGTTA AAGCACAGGG TGGGGAGATT GGTGCAGATC ACTCACCTTT AGGCGGCCTT AAAATCAAAA TAACCCTCCC TGCCAAGGAT ATTTAG
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Protein sequence | MRLTLFRKLF ISLLLISSIM MVGMALLINN SFQTGLQNYL NHRETEEMQV IAEKISQYYS PENGWRMIEE QPYLWTNLLR KVGNHPARER ANSHRDRPPQ EQFLINPRIF LLNVQGEAVL DRARKMKERN ERDQFIKVPI ILDEQNIGWI AIIQKEIITG KLTKIFFKQQ LNNFYWIAAW AALFSFVVAA LLVRHFLQPL KNLGLSVKAL QRGDFNYQIP VKGQDELAEL SKTFNHLTNT LKLQKVSREQ WIADISHELR TPIAVLVSEI EAIEDGIRKP EPKYIKSLHE QVMNLSRLVD DLYQLSLSDA GVLTKNTERV NLTRLLDNIA NQNELRLAEK NIHLQRCYDS SKATLLQADP NALSQLILNL FENSYRYTDP DGQLKLTLSQ RLNRVELIIE DSAPAVPDDA LPKLFERLFR VDKSRSRANG GSGLGLSICQ NIVKAQGGEI GADHSPLGGL KIKITLPAKD I
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