Gene Ping_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0987 
Symbol 
ID4626576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1246048 
End bp1247463 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content40% 
IMG OID639796204 
Productsensor histidine kinase 
Protein accessionYP_942426 
Protein GI119944746 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000915173 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.356896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAA CCCTTTTCCG TAAGTTATTT ATCTCGTTGT TGCTGATTAG CTCTATCATG 
ATGGTCGGCA TGGCGCTGCT TATTAATAAT AGTTTTCAAA CCGGATTACA GAACTACCTT
AACCACCGGG AAACAGAAGA AATGCAGGTT ATTGCTGAAA AAATCAGCCA ATATTACTCG
CCTGAAAATG GCTGGAGAAT GATTGAAGAA CAGCCCTATT TATGGACCAA TCTTTTAAGA
AAAGTAGGAA ATCATCCTGC CAGAGAAAGA GCTAATTCGC ATAGAGATCG TCCTCCTCAA
GAACAATTTT TAATAAACCC GCGCATTTTT CTATTAAATG TACAGGGGGA AGCGGTGCTG
GATCGCGCCA GAAAAATGAA AGAGCGCAAT GAAAGAGATC AGTTTATTAA AGTGCCCATT
ATATTGGATG AACAAAATAT TGGCTGGATT GCGATTATAC AAAAAGAGAT TATCACGGGA
AAATTAACCA AAATTTTCTT TAAACAGCAA TTAAATAATT TTTACTGGAT TGCCGCCTGG
GCGGCGCTGT TTTCTTTTGT GGTTGCAGCT TTATTAGTGC GACATTTTCT TCAGCCTTTA
AAGAATCTTG GCCTTAGTGT AAAGGCCTTA CAAAGGGGGG ATTTTAATTA TCAAATCCCG
GTGAAGGGAC AGGATGAGTT AGCTGAATTA TCAAAAACTT TTAATCATTT AACCAATACG
CTTAAGCTGC AAAAAGTCTC TAGAGAGCAA TGGATTGCGG ATATCTCCCA TGAATTACGC
ACACCTATTG CCGTTTTAGT CAGTGAAATA GAAGCTATTG AGGATGGTAT TCGCAAACCT
GAGCCTAAAT ATATTAAATC ATTACATGAG CAGGTAATGA ATCTCAGTCG CCTTGTTGAT
GATCTTTATC AATTATCACT TTCTGATGCA GGTGTGCTGA CTAAAAATAC AGAGCGGGTA
AATTTAACCC GGTTGTTAGA TAATATTGCA AATCAGAATG AATTACGATT AGCTGAAAAA
AATATCCACC TGCAGCGTTG TTACGATTCC AGTAAAGCCA CTCTGTTGCA GGCTGATCCT
AACGCACTAT CGCAGCTCAT TTTAAATCTT TTTGAAAATA GTTATCGTTA TACTGACCCG
GATGGACAGC TTAAGCTTAC TTTGTCGCAG CGCCTCAATA GGGTTGAATT GATTATCGAA
GACAGTGCAC CCGCCGTGCC CGATGATGCT CTGCCAAAAC TCTTCGAGCG TTTATTTCGC
GTTGATAAAT CACGCAGCAG AGCCAATGGA GGCTCTGGTT TAGGTTTATC TATTTGCCAA
AATATTGTTA AAGCACAGGG TGGGGAGATT GGTGCAGATC ACTCACCTTT AGGCGGCCTT
AAAATCAAAA TAACCCTCCC TGCCAAGGAT ATTTAG
 
Protein sequence
MRLTLFRKLF ISLLLISSIM MVGMALLINN SFQTGLQNYL NHRETEEMQV IAEKISQYYS 
PENGWRMIEE QPYLWTNLLR KVGNHPARER ANSHRDRPPQ EQFLINPRIF LLNVQGEAVL
DRARKMKERN ERDQFIKVPI ILDEQNIGWI AIIQKEIITG KLTKIFFKQQ LNNFYWIAAW
AALFSFVVAA LLVRHFLQPL KNLGLSVKAL QRGDFNYQIP VKGQDELAEL SKTFNHLTNT
LKLQKVSREQ WIADISHELR TPIAVLVSEI EAIEDGIRKP EPKYIKSLHE QVMNLSRLVD
DLYQLSLSDA GVLTKNTERV NLTRLLDNIA NQNELRLAEK NIHLQRCYDS SKATLLQADP
NALSQLILNL FENSYRYTDP DGQLKLTLSQ RLNRVELIIE DSAPAVPDDA LPKLFERLFR
VDKSRSRANG GSGLGLSICQ NIVKAQGGEI GADHSPLGGL KIKITLPAKD I