| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0974 |
|---|
| Symbol | |
|---|
| ID | 4626528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1222991 |
|---|
| End bp | 1224628 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639796191 |
|---|
| Product | sucrose-6-phosphate hydrolase |
|---|
| Protein accession | YP_942413 |
|---|
| Protein GI | 119944733 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
|---|
| TIGRFAM ID | [TIGR01322] sucrose-6-phosphate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00444569 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTAT TCTCAATTAT TAAAGACTGT GGTGGTATTC ATAATATCCA GCGTGTTCTT
ATCCCTGATT CGCGTATTAT TATTGAGATT CATGAGTTTG AATTGTTATC TGCAGAGGCA
AAACAACAAG CTTATAATTT AACTCTAAAG CAGGTGACTT ATCAGCAAAC TGTTATTGAA
AATAAAGATG AATTTGGGGC GCAACTATTA GAGATTGGCC AGCTAATCAG TGATCAACAG
CGGCAGGACA TTACGCCTTA TACAGCGCCC GTTGAATGTG AGTTTCGTCC CGACTGGCAT
ATCTCGCCCC CACAAGGTTT GTTAAACGAT CCGAATGGTT TTATTTATCA CCAAGGACAA
TATCACCTTT TTTATCAGTG GTACCCCTAT ACTTGTGTAC ACAAAGATAA GTATTGGGCG
CATTTAACCA GCAAAGATTT AGTGAACTGG CAGTGGCAAC CAGTTGCTTT AACGCCCTCG
GACTGGTTTG ACAGCTACGG TGTTTTTTCA GGTCACGCGA TTAGTCAGGA TGATCTGTTA
ATGTTGTTTT ATACCGGCAA TGTGCGTATT GGTGAGCAGC GAGACAGACA CACCACCCAA
TGTTTGGCCA CTTCAACGGA TGGTATTCAC TTTACTAAAC AGGGCCCGGT TGTGCCTGAA
TTGCCACCGG GGGTGACACC GCATTGCCGC GATCCCAAAG TTATCCGTCA TAATGACCGT
TGGTTAATGT TGCTGGGTGT ACAGCGTGAA GATGAAATTG GCCGTTTAGC GATTTACCAC
TCGGAGGATC TCAAAACCTG GACATTTATT GCCCTGTGTG GTGACGAGTT GGGTGATTTT
GGTTATATGT GGGAATGCCC TGATTTTTTC ACCTTAAACC AGCAAGACTT TATTGTTATT
GGCCCGCAGG GCATTAGATC GCCTGATAAG AGCCATACCG CCCCGCATCA CAACGGTATT
GTCAAAGCGC AACTGGAGAC AAGCGGCAAA GCCCTGTTAT CTGATTTTCA ACCTTTAGAT
TATGGTTTTG ATTTTTATGC CCCGCAATCA TTAGAGACCC CCGACGGGCG AAGAATTATG
TGTGCCTGGA TGGGGTTGCC CGATGAAATC GATCATCCGA GCGCCGACAA TGGTTGGGTA
CATCAATTAA CCACAATGCG GGAATTATCC TATGACAATG GTGCGTTAAT CCAAAAACCC
ATTAAAGAGT TGGCAACGCT TCGTCATACG CCGATTGTGC TATCGAAAGA TGAAACTTCT
TTTGATTTGC ACAGTAAAGC ATTTGAGCTG CAAGTTTCAA TGCAGTGGGG CAGTGTTTTA
CGTTTACACC AGTCTGAGTC CGGTTATTGT GAAATTCGTC TAGATTCAGC ATCGCGTCGA
TTATATATTG ATCGCAGTAA TACCCTGATA CGCGAAGGAG ATACCGTGCG TGAAATGTCT
TTGGCCGAAT CTGATTCGGT TCAGCTGCAC ATATTCTCTG ATACTTCGTC ATTAGAGGTT
TTTATTAATG AGGGGGAAGC GGTAATGTCA GCGCGTGTGT TTACCGATAA GAATTCCACA
CAGTTGAGCT TCGATGGAGA TGTGCAGATA CAGGCCTGCT GGTTATTAAA TAAAGCAAGC
GCTCCCTTCA TATCTTAA
|
|---|
| Protein sequence | MSLFSIIKDC GGIHNIQRVL IPDSRIIIEI HEFELLSAEA KQQAYNLTLK QVTYQQTVIE
NKDEFGAQLL EIGQLISDQQ RQDITPYTAP VECEFRPDWH ISPPQGLLND PNGFIYHQGQ
YHLFYQWYPY TCVHKDKYWA HLTSKDLVNW QWQPVALTPS DWFDSYGVFS GHAISQDDLL
MLFYTGNVRI GEQRDRHTTQ CLATSTDGIH FTKQGPVVPE LPPGVTPHCR DPKVIRHNDR
WLMLLGVQRE DEIGRLAIYH SEDLKTWTFI ALCGDELGDF GYMWECPDFF TLNQQDFIVI
GPQGIRSPDK SHTAPHHNGI VKAQLETSGK ALLSDFQPLD YGFDFYAPQS LETPDGRRIM
CAWMGLPDEI DHPSADNGWV HQLTTMRELS YDNGALIQKP IKELATLRHT PIVLSKDETS
FDLHSKAFEL QVSMQWGSVL RLHQSESGYC EIRLDSASRR LYIDRSNTLI REGDTVREMS
LAESDSVQLH IFSDTSSLEV FINEGEAVMS ARVFTDKNST QLSFDGDVQI QACWLLNKAS
APFIS
|
|---|
| |