Gene Ping_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0958 
Symbol 
ID4626670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1203829 
End bp1204332 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content38% 
IMG OID639796176 
ProductNLP/P60 protein 
Protein accessionYP_942398 
Protein GI119944718 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.414472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.258055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAATA AGTTAAAGGT GAGCTGCTGC TCTATTATTT TATTAATCAT GCTGAGTGCA 
TGTTCGAGTT CTTCCCCTGT TGCGGGGCAA TCAGAATCTT TTAAAAAAAT AACAGATGGA
ACATTGATGG AAGAGGTCGC CAGTGTTTTA TTACGTAATG AATTTGATAT TTGGGAAGGT
ACTCCCTATC GCTTTGGCGG AACGAATAAG CAGGGTATAG ATTGTTCAGC CTTGATACAA
AAAATCTACT TAAGCAGTTT CAATCTAAAA TTGCCGCGCA CCACTAAAAG ACAATCTCGG
CAAGGTTATC TTATTAATAA AAGTAAATTA CAGGTGGGTG ACTTGGTGTT TTTCAAAACA
AGTTTAACTG ATAATCATGT TGGTATTTTT ATTGGTAATG GTCTATTTTT ACACGCTTCC
AGCAGCCAGG GGGTGATGAT CTCCGTATTA AATAATAGCT ATTGGCGTTC CAAATATTGG
CAGTCCCGAC GCATCCTCAA CTGA
 
Protein sequence
MVNKLKVSCC SIILLIMLSA CSSSSPVAGQ SESFKKITDG TLMEEVASVL LRNEFDIWEG 
TPYRFGGTNK QGIDCSALIQ KIYLSSFNLK LPRTTKRQSR QGYLINKSKL QVGDLVFFKT
SLTDNHVGIF IGNGLFLHAS SSQGVMISVL NNSYWRSKYW QSRRILN