| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0949 |
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| Symbol | |
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| ID | 4626782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1183778 |
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| End bp | 1186666 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639796163 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_942389 |
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| Protein GI | 119944709 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCTAG AGAGTAAAAG AAAATATAAC TTTATTCTTG TAACCATACT TCTGTTCTTG
TCCTACCCCC TACTCAGATC GATAGAGTGG CATGGAAGCA CTCATCTTCA TACTTTCATG
GAAATAATTG CTACGTTATT AGCACTGTTT GTTGGAATAT TATCCTTTAT TCACTACCAC
ACAAACAAAA GTAATCAATT ATTTTTATTA ATAGCGGTTG GTTTCTTTGG AACCGCTTTT
TTAGATGGCT ATCACGCAAT AGTCACCTCC CTCTTTTTTG CTGAATATTT TCCCAGTATA
CCTTCGTCCC TTATTCCCTG GAGCTGGATA GCGTCCAGGC TGTTTTTATC AATATTTCTC
TTTTGGAGTT ATATCCATTT TAGATATATG CACAGCACTA CTATAAATGA AAGGCACCTT
TATACTTTTG CTTCCCTCAG TACCCTCACA ACATTCCTGT TTTTTGCATT TGTCCCGCTT
TCTAATGCGT ATAATACGGA ATTTATATTT CACAGGATGG CGGAATGGGT ACCAGGATTG
TTTTTCTCAT TAGCGCTCTG CGGCTATCTT GTTAAAGGAA ACTGGAAAAA GGATATTTTT
GAATATTGGC TTACGCTTTC ATTAATTGTC AGCGTGATAT CACAGATTGT TTTCATGTCT
TCTTCAGAGG TCTTGTTTGA TATTGAATTC GACGCTGCGC ACTTATTGAA AAAAATCAGT
TATATATTGG TGCTAATAGG ACTGTTAAAA AGTATATATA AACTGGTTCT ATATGGGGTA
ATACAGCGGG CAGAGTTGAT CAAACAAACA TATAAACTCA AAAGGTATCA AAGAATTGCG
GGATTAGGAA GTTATCTTCT TAATTTTAAA ACAGGAATAT GGACAAGTTC AGAGATACTG
GATGAGTTAT TCGGAATAGA TCAATCTTAT AATCATTCAA CAGAAGGATG GACTCTTATC
GTTCACCCTG ATGATCGTAT CAAAATGGAT GACTATTTGA AAAATGAAGT GCTTGCCAAG
GGTAAACCCT TCGACAAAGA ATATCGTATT GTACGTCAGA CTGACCAATC TATACGCTGG
CTTCATGGTC TAGGAAAACT TGAATTTGAT AACGATGGGT TACCTGTAAA AATGGTCGGC
ACTGTTCAAG ATATCACGGA ACAAAAACGT GCTTCTGATT CGCTGCTCAA ACTCTCATTA
GCTGTTGAAC AAAGCCCAAA TTCTATTGTT ATTACCGATC TTGATGGCAA GATTGAATAT
GTTAATAATA TGTTTATAAA GGTAACCGGA TACAGTCGGG ATGAAGTACT TGGTCAAAAC
CCTCGTATAT TGAAATCAGG TAAAACACCG CAAACAACCT TTAAAGAGAT GTGGGCCCAT
TTGACACGCG GTGACATATG GCATGGTGAA ATTATAAATC GCCGCAAAGA CAAAAGTATC
TATATCGAAT CGGCTACCAT CACGCCCGTA AAACAAGCTG ATGGCAAAAT AACCAACTAT
GTGGCTATCA AAGAAGACAT TACTGAAAAA AAGAAGGCTG AAGCCTATAC TGAAAACCTC
GCTTATTTCG ATCAGCTCAC GGGATTACCA AACCGTCGTA TGCTGCAAGC TCAGGTTAAA
TACCGGCTTA ATATGGCACA AAGCAATCAT CAACCTTTAA CGGTGATGTT CCTGGATCTC
GATAATTTCA AAAATATCAA CGATTCTTTA GGACATACTG TTGGCGATCA AGTATTAATA
AAGATCGCAA AACGAATCAA GAAAGCAATT CGGGAAGTAG ATACCGTGTC GCGTTTGGGA
GGTGACGAAT TTATTATGCT TTTCCCTAAT ACCGATGCGA ATGCGGCAAT GCATATTGCC
ACAACTCTGA TTCAAGAAAT TTCCAAAGCT TCTGTCGTTG AACACAATGA GCTGACTATA
ACGCCTTCAA TCGGGATTGC TATCTATCCA AATGACGGTA ACGATTTCAA AACACTGCTA
AAAAATGCCG AGACTGCTAT GTACAGGGTC AAGAATGACA GTCGCAACGG TTTTCATTTC
GTTACACCGG AGATGCAGTT AAGTGCATCC CGTAACCTGC AATTGGAAAA TGCACTGCGC
CATGCACTAA AACGTAATGA ACTGCAACTA TATTATCAGC CACAAATTTC AACATCTAAC
GGACAAATTA TAGGGGCTGA AGCCTTATTA AGATGGCATC ATCCAGAACT TGGAATGATC
TCTCCTGCTG AATTTATCCC AATAGCAGAA AGTAGCGGTC AAATTATTGA GATTGGGGAA
TGGGTTCTTC GCACCGCGAT AAGGCAAACA AAAAACTGGA TGGACGACGG ATTTACTCCC
ATGATAATCG CAGTAAATTT ATCTGTAGTG CAGTTTAGAC AGAAAAACTT ACTGACTCTG
ATCACCGACA TTCTGGCCGA AGTACAATTG CCAAACGAAT ATCTGGAATT GGAACTGACC
GAAGCGGTTA CGATGCATGA TCCGGAGTCT GTGATTAATG TTATGAATAC GTTTCACGAG
CAGGGAATCC GCATGTCCAT CGATGATTTT GGTACAGGAT ATTCTTCTCT AAGCTATCTG
AAAAAGTTCA AAGTATACAA ACTGAAGATA GATCAATCCT TTATACGTGA TATTTCAAAT
GATCCTGACG ACCGCGCTAT TGTCAGTGCC ATCATAGATA TGGCAAGCAA CCTAGGATTA
CAAACTATTG CAGAAGGCGT CGAAACTGCC GAACAGTTAG CCTTCTTGCG GCTACATGGA
TGTCATGAGG TACAAGGATA CTATTTCAGC AAACCGCTTC CTTCTGTGGA GTTTGAACAG
TTCCGACATA ATCATGATTT GACTTCCCCT CCGCTAAATC AGCAAGCTGA CTTTGAAGGA
GATTATTAG
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| Protein sequence | MTLESKRKYN FILVTILLFL SYPLLRSIEW HGSTHLHTFM EIIATLLALF VGILSFIHYH
TNKSNQLFLL IAVGFFGTAF LDGYHAIVTS LFFAEYFPSI PSSLIPWSWI ASRLFLSIFL
FWSYIHFRYM HSTTINERHL YTFASLSTLT TFLFFAFVPL SNAYNTEFIF HRMAEWVPGL
FFSLALCGYL VKGNWKKDIF EYWLTLSLIV SVISQIVFMS SSEVLFDIEF DAAHLLKKIS
YILVLIGLLK SIYKLVLYGV IQRAELIKQT YKLKRYQRIA GLGSYLLNFK TGIWTSSEIL
DELFGIDQSY NHSTEGWTLI VHPDDRIKMD DYLKNEVLAK GKPFDKEYRI VRQTDQSIRW
LHGLGKLEFD NDGLPVKMVG TVQDITEQKR ASDSLLKLSL AVEQSPNSIV ITDLDGKIEY
VNNMFIKVTG YSRDEVLGQN PRILKSGKTP QTTFKEMWAH LTRGDIWHGE IINRRKDKSI
YIESATITPV KQADGKITNY VAIKEDITEK KKAEAYTENL AYFDQLTGLP NRRMLQAQVK
YRLNMAQSNH QPLTVMFLDL DNFKNINDSL GHTVGDQVLI KIAKRIKKAI REVDTVSRLG
GDEFIMLFPN TDANAAMHIA TTLIQEISKA SVVEHNELTI TPSIGIAIYP NDGNDFKTLL
KNAETAMYRV KNDSRNGFHF VTPEMQLSAS RNLQLENALR HALKRNELQL YYQPQISTSN
GQIIGAEALL RWHHPELGMI SPAEFIPIAE SSGQIIEIGE WVLRTAIRQT KNWMDDGFTP
MIIAVNLSVV QFRQKNLLTL ITDILAEVQL PNEYLELELT EAVTMHDPES VINVMNTFHE
QGIRMSIDDF GTGYSSLSYL KKFKVYKLKI DQSFIRDISN DPDDRAIVSA IIDMASNLGL
QTIAEGVETA EQLAFLRLHG CHEVQGYYFS KPLPSVEFEQ FRHNHDLTSP PLNQQADFEG
DY
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