| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0946 |
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| Symbol | |
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| ID | 4626768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1178957 |
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| End bp | 1179523 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639796150 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_942387 |
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| Protein GI | 119944707 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.49056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTAT TTAATCGAAA ACGAAATATA AGTTCAAAAT CCTTGGTCTT TAAGGATATG
AATAAAAAAC AGAAACGTTA TGAAGCACTC GTCAATATCT ATAGCCCGGA TCTTTACCGT
TATGCATTTT GGATCTGTCG TGATCCTCAT ATAGCACAAG ATTTAGTGCA GGAGACCTGC
TTGCGCGCCT GGAAGAGTCT GGACAGTTTA TTGGACGATA AAGCCGCTAA AGGTTGGTTA
TTTACCATAT TACGTCGTGA AAATGCACGT CGTTTTGAAC GCAAGCAGTT TTCTTTAGTC
GATATCGCTG ATAACGAAGT GGCGGATGAT CATGATTCAT CAGAAGAGAT GGATAAAGAA
TTATTACGTC GTAAAATATT GCGCTTAGCA GATGAATATA AAGACCCTTT GTTATTGCAG
CTTATCGCAG GTTTTAGCAC TGAGGAAATT GCGCAGCAGC TAAATTTAAA TAAAAACACC
GTATTAACGC GGTTGTTTAG AGCAAAGAAT TTATTAAAAT CATCATTATC AGCAACAACT
AAAAGTAGTG GGGTAGCACA TGGATGA
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| Protein sequence | MNLFNRKRNI SSKSLVFKDM NKKQKRYEAL VNIYSPDLYR YAFWICRDPH IAQDLVQETC
LRAWKSLDSL LDDKAAKGWL FTILRRENAR RFERKQFSLV DIADNEVADD HDSSEEMDKE
LLRRKILRLA DEYKDPLLLQ LIAGFSTEEI AQQLNLNKNT VLTRLFRAKN LLKSSLSATT
KSSGVAHG
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