Gene Ping_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0943 
Symbol 
ID4624949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1176694 
End bp1177422 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content41% 
IMG OID639796147 
ProductAllergen V5/Tpx-1 family protein 
Protein accessionYP_942384 
Protein GI119944704 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA TTAACTTACT TAATGACGCT ATCTCTTTAA TACAAAAAAC CTTGTGGCTT 
TCTATCTGCT TAAGTATGAC GGTTAGTACA GCATCAGCGT CCATCGACTG GCCAACGGCT
GGGTGGCCAG TCAAAAAACT AACCCCGGCA GACGATCTAA GTTATTTAAG CGTATTAGAG
AAAAATATAA TTTTACACCT TAATATGGCA AGAACAGATC CGAGTCGCTA TAGCCAAGAA
TTTATAGCTC CGCGCAGCGC TTTTTACAAT AATAAAATGT ACTTAAAGCC AGGTGGAGCT
GAAAATTTTA TCGGACTGAA AACACAAGAG GGTCTAAGCG CGGCTGATGA AGCAGCTAAA
GTAATGAGCA GCACAAAAGC TTTAGGGTCA TTAAAAGCAC ATAAAAAATT AACCTTAGCG
GCCCAAGATC ATGCCGCTGA CCAATCTAAA TATGGCGGTA TTGGACACGT TAGCCATAAT
GGCTCAACCC TGCAAAATAG AATTGAAAGA TATGGAAAAT GGCAGCATAC AATAGGTGAA
AATATTATCT ATGGCCCAGA TTCTGGACGA GAAGTCGTGG TTCAATTATT GATAGATGAT
GGTGTTAAAA GTCGCGGTCA TCGCACTAAT ATACTGAAAA ATGATTATAA GGTAGTGGGC
GTCGCCTGCG ACAAACATCC TTCCTACGGC ATTGTGTGCG TGATGGACTT TGCAGGTGGG
ATCGAGTGA
 
Protein sequence
MTKINLLNDA ISLIQKTLWL SICLSMTVST ASASIDWPTA GWPVKKLTPA DDLSYLSVLE 
KNIILHLNMA RTDPSRYSQE FIAPRSAFYN NKMYLKPGGA ENFIGLKTQE GLSAADEAAK
VMSSTKALGS LKAHKKLTLA AQDHAADQSK YGGIGHVSHN GSTLQNRIER YGKWQHTIGE
NIIYGPDSGR EVVVQLLIDD GVKSRGHRTN ILKNDYKVVG VACDKHPSYG IVCVMDFAGG
IE