Gene Ping_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0938 
Symbol 
ID4624944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1172473 
End bp1173075 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content42% 
IMG OID639796142 
Productcytochrome c oxidase, cbb3-type, subunit II 
Protein accessionYP_942379 
Protein GI119944699 
COG category[C] Energy production and conversion 
COG ID[COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit 
TIGRFAM ID[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG AATTTATTGA AAAGAATGTT GGGTTACTGG CTATCCTTAT CATCATTGCC 
ATCAGCTTTG GTGGTTTGGC GCAAATTACA CCATTAATTT TCCAAAAAGA AACGAATACA
CCCGTTGATA CATTACGCCC CTATACTGCA TTAGAAATGG AAGGTCGTGA TATTTATATT
CGCGAAGGAT GCAGTGTGTG TCATAGCCAA ATGATACGCC CTTTCAGAGC AGAAACAGAA
CGTTATGGAC ACTACAGTGT CGCTGGTGAA GGTGTTTGGG AACATCCATT TTTATGGGGT
TCAAAACGCA CAGGACCGGA TCTGGCGCGT GTTGGTCAAC GTTATTCAGA TGCCTGGCAT
AAAATTCACC TGCTTAATCC ACGTGATGTT GTACCACAAT CAAATATGCC TGGCTTCCCA
TGGCTTGCAG AGAACCACTT AACAGGTGAA GATACAGCGC GTAAATTGGA CATCTTTAAA
AATAACTTCG GTGTTCCGTA TACGGATGAG GATATTGCAG GAGCAAAAGC AGCAGTTGAA
GGAAAAACTG AAATGCAGGC GTTAATTGCT TACCTGCAGT CACTTGGACA TGCTTTAAGA
TAA
 
Protein sequence
MKHEFIEKNV GLLAILIIIA ISFGGLAQIT PLIFQKETNT PVDTLRPYTA LEMEGRDIYI 
REGCSVCHSQ MIRPFRAETE RYGHYSVAGE GVWEHPFLWG SKRTGPDLAR VGQRYSDAWH
KIHLLNPRDV VPQSNMPGFP WLAENHLTGE DTARKLDIFK NNFGVPYTDE DIAGAKAAVE
GKTEMQALIA YLQSLGHALR