Gene Ping_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0936 
Symbol 
ID4624942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1171270 
End bp1172235 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content42% 
IMG OID639796140 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_942377 
Protein GI119944697 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT TTTGGACATT ATGGATCACG ATAATCACAC TGACCGTTAT TATCGGTTGT 
GCAGTATTAC TTAGAGCCAC CACAAAAAAT AATACTGGCG TCGAAGAAGG CCAACCGATG
CCACATACTT ATGATGGTAT TCAAGAGTTA AATAACCCGC TGCCTAAATG GTGGGTGGGC
TTATTTTGGT TTACTATTGT CATTGCTTTA CTGTACAGCA TAATGTTTCC AACCTATGGC
AGTAACTGGA ATGGATTGCT TAATTGGAGC AGTTCAGAGC AAAGTACATT AACACGACAA
GAAAGAAACG AATTAGCCAA AACCTCGCAG TCCCAGTACC AACGTGAAAT GAATGCAGCT
GAGGAAAAAT ATGGTGCAGT CTTTAAGCAA CTTACTTATG ATGAAAATGG TGTTTATAAA
GACCTCACTT TAGTGGCTCA AGATTCTGAA GCAATAAAAG TTGGCCAACG TTTATACCTG
CAGAATTGTT CTCAGTGCCA TGGCTCCGAT GCACGTGGAA GTACCGGATT TCCCAACCTG
ACCGACAATG ATTGGTTATA TGGTGGTGAT GCCGATACCA TTAAGCTAAC GCTTATGCAT
GGTCGTAAAG GTGCTATGCC AGCATGGGCG GACATCCTAG GCGAACAAGG CATTAAAGAA
GTCACCAGCT ATGTATTACA ATTGAGTGGC CGCCGCGTTG ATTTGCTTGA AGCAAAAGCC
GGAAAAGAAC GTTTTGTTGT CTGCAGTGCC TGTCATGGTG CTGACGGTAA AGGAATGCAT
GCAGTGGGAG CGCCTAATCT GACAGATACC ATATGGTTAT ATGGTGGCTC TCGTAAAGCT
GTTGAAGCGA CACTTAGAAA CGGTCGAAAT GGTGTAATGC CAGCTTGGAA GGATGTATTA
GGTGAAGATA AAATTAATTT GATCTCAGCT TATGTCTATT CTCTTTCTCA GCAGGATAGT
CAATAA
 
Protein sequence
MSIFWTLWIT IITLTVIIGC AVLLRATTKN NTGVEEGQPM PHTYDGIQEL NNPLPKWWVG 
LFWFTIVIAL LYSIMFPTYG SNWNGLLNWS SSEQSTLTRQ ERNELAKTSQ SQYQREMNAA
EEKYGAVFKQ LTYDENGVYK DLTLVAQDSE AIKVGQRLYL QNCSQCHGSD ARGSTGFPNL
TDNDWLYGGD ADTIKLTLMH GRKGAMPAWA DILGEQGIKE VTSYVLQLSG RRVDLLEAKA
GKERFVVCSA CHGADGKGMH AVGAPNLTDT IWLYGGSRKA VEATLRNGRN GVMPAWKDVL
GEDKINLISA YVYSLSQQDS Q