Gene Ping_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0921 
Symbol 
ID4623576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1153039 
End bp1154310 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content39% 
IMG OID639796125 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_942362 
Protein GI119944682 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0622234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.218406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTC TACTTGAAGA TTTACAAGCG CGAGGTTTAA TCGCGCAAAT GACTGCAGAT 
GAAGAATTAC ATGAACATTT ATCAAGTGGC TGCAAAACAC TTTATTGTGG ATTTGATCCG
ACGGCAGACA GCCTGCATAT CGGAAGTTTA GTGCCACTCG TCACATTGAA ACGTTTCCAG
GACGCGGGTC ATAAGCCATT AGCTTTGGTC GGTGGCGCAA CCGGATTGAT TGGTGATCCA
AGCTTTAAAG CGGTGGAACG TAAATTAAAT ACTGATGATG TTGTTGCAGA TTGGGCGGAA
AAAATCAAAG GGCAAGTCAG TGCTTTTATC GAATTTGGTG ATCGGGAAAA TTCAGCAGAG
GTTGTTAATA ACCTTGATTG GATTGGCAAA ATGGATACTA TTTCCTTTTT GCGTGATGTG
GGTAAACATT TTAGTGTTAA TGCCATGATT CAAAAAGAAT CTGTTAAACA GCGTATTGAT
CGTGATGGTT CGGGTATGTC ATTTACTGAA TTTACCTATA TGTTATTACA ATCTTATGAT
TTTGCAGCTT TAAATAAAGC TAATGGTTGT TCACTGCAGA TTGGTGGCTC AGATCAATGG
GGTAATATAA CCGGCGGTAT TGATTTAACA CGGCGCATGA ATCAAGAAAA AGTATTTGGT
TTGACGCTAC CTTTAGTCAC TAAATCTGAC GGCACAAAAT TTGGTAAGAC AGAAGCAGGC
ACTATCTGGC TTGATGCCGC AAAAACATCG CCTTATGCAT TCTTCCAATT CTGGATAACA
ACATTAGATG CGGATGTTTA CAAATTTCTT CATTATTTTA CTTTCTTATC TGTTGAAGAA
ATTGCTGCGA TTGAAGAAAA TGATAAAACC ATTCAAGGCC GTCCTGAAGG GCAAAATATT
TTGGCGCAGC AAGTTACAAA GATGGTTCAT GGTGAACAAG GTTTAGGCTC AGCACAACGT
ATTACCGAAG CCCTGTTTTC TGGTGATTTA AGCGCATTAG ATGAATCGGA TCTGGCACAA
CTTGCGCAGG ATGGTTTACC TGCAACCTTT GTTGAAGGGA CAGAAAAACC ATTAGTTGAA
TTATTGACCA GTTGTGAGCT TGCTAAATCG AATAAAATGG CGCGAGAATT TATTAAAAAT
GGTGCGGTCA GTATTAATGG CGAAAAACAA ACCGATAGTG AAGTCATTTT ACAAAAATTA
GATGCGTTAT TTGGTAAATA TACTGTGATT AAGCGTGGTA AACGCTTGTT CAATTTATTT
ATATGGAGAT AA
 
Protein sequence
MNALLEDLQA RGLIAQMTAD EELHEHLSSG CKTLYCGFDP TADSLHIGSL VPLVTLKRFQ 
DAGHKPLALV GGATGLIGDP SFKAVERKLN TDDVVADWAE KIKGQVSAFI EFGDRENSAE
VVNNLDWIGK MDTISFLRDV GKHFSVNAMI QKESVKQRID RDGSGMSFTE FTYMLLQSYD
FAALNKANGC SLQIGGSDQW GNITGGIDLT RRMNQEKVFG LTLPLVTKSD GTKFGKTEAG
TIWLDAAKTS PYAFFQFWIT TLDADVYKFL HYFTFLSVEE IAAIEENDKT IQGRPEGQNI
LAQQVTKMVH GEQGLGSAQR ITEALFSGDL SALDESDLAQ LAQDGLPATF VEGTEKPLVE
LLTSCELAKS NKMAREFIKN GAVSINGEKQ TDSEVILQKL DALFGKYTVI KRGKRLFNLF
IWR