Gene Ping_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0920 
Symbol 
ID4623575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1152198 
End bp1152893 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content40% 
IMG OID639796124 
Productmethylthioadenosine nucleosidase 
Protein accessionYP_942361 
Protein GI119944681 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.199086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG GCATTATTGG TGCGATGGAT GAAGAAGTCA GCATCCTTAA AGCGAAGTTA 
AATAACATGG AAACAACGAT CATTGCAGGT TGTGAATTTT ACCAGGGTGA ATTAAATGGT
AAACAGGTTA TCTTAACCAA ATCAGGCATA GGTAAAGTTG CTGCTGCCGT GGCAACGACA
CTGTTACTGG AAAGATTTAA TCCAGGTCAG GTAATTAATA CGGGTTCCGC TGGGGGTTAC
GATACAACGC TTAATGTAGG CGACATTGTG ATATCAACAG AAGTACGTTT TCATGATGTC
GATTTAACTG CATTTGGTTA TGAAATTGGC CAAATGGCGC AATTGCCTGC CGCTTTTCCA
GCAGATAAAA ATCTGATTTT CGCAGCACAA AAAGCCGCTG AAACGATTAC CCATTTAAAA
ACCATTCAGG GATTAATCTG TACGGGTGAT ATTTTTATGG CGGATCCAAC AAAAGCTGAA
ATAGCACGTC ATAATTTCCC AACAATGGCG GCATGTGAAA TGGAAGCTGC GGCCATTGCA
CAGGTTTGTT ACCAGTTTAA AGTGCCTTTT GTGATCATCC GTTCACTCTC GGATATTGCC
GGTAAAAAAT CAGAATTATC CTTTGAGCAA TACCTGCCGA TTGCTGCTAA AAATGCATCA
ATACTTGTTG AAGAAATTAT CAATAACTTA AACTAG
 
Protein sequence
MKIGIIGAMD EEVSILKAKL NNMETTIIAG CEFYQGELNG KQVILTKSGI GKVAAAVATT 
LLLERFNPGQ VINTGSAGGY DTTLNVGDIV ISTEVRFHDV DLTAFGYEIG QMAQLPAAFP
ADKNLIFAAQ KAAETITHLK TIQGLICTGD IFMADPTKAE IARHNFPTMA ACEMEAAAIA
QVCYQFKVPF VIIRSLSDIA GKKSELSFEQ YLPIAAKNAS ILVEEIINNL N