Gene Ping_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0917 
Symbol 
ID4623572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1147741 
End bp1149663 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content39% 
IMG OID639796121 
Productchaperone protein DnaK 
Protein accessionYP_942358 
Protein GI119944678 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.426947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAA TAATCGGTAT TGATTTAGGT ACAACAAATT CATGTGTATC TGTACTTGTT 
GGTGGCGTAG CAAAAATCAT CGAAAATGCA GAAGGTGAAC GTACAACACC TTCAATCATC
GCTTACACTG AAGGTGAAAC TTTAGTTGGA CAACCTGCAA AACGTCAGTC GGTCACTAAC
CCTCAAAATA CTCTTTTTGC GATTAAACGT TTAATCGGTC GTCGTTATGA AGATGAAGAA
GTACAACGTG ATATCAAAAT CATGCCTTAC AAAATTGTTA AAGCTGACAA TGGTGATGCA
TGGGTAGAAG CGCACGGCAA CAAAATGGCA CCGCCACAAA TCTCTGCTGA AGTTTTGAAA
AAAATGAAAA AAACAGCTGA AGACTATTTA GGCGAGAAAG TGACTGGCGC AGTAATCACT
GTACCTGCAT ATTTCAACGA TGCGCAACGT CAAGCAACTA AAGATGCTGG TCGAATTGCG
GGTCTTGAAG TTAAACGTAT TATCAATGAG CCAACGGCTG CTGCATTTGC ATACGGTGTC
GACAGTTCTA AAGGCGACAG TGTTATTGCT GTATACGACC TAGGTGGTGG TACTTTTGAT
ATCTCAATCA TTGAAATTGA TGAAGTAGAT GGCGAAAAAA CCTTCGAAGT ATTATCAACA
AATGGTGATA CTCACTTAGG TGGTGAAGAC TTTGATAACC GTTTAATCAA CTTTTTAGTG
GCTGAATTCA AAACACAACA AGGTTTTGAT TTAACCAATG ATCCGCTTGC AATGCAACGT
GTTAAAGAAG CAGCTGAAAA AGCAAAAATT GAACTGTCAA GTGCACAACA AACAGATATC
AACCTGCCTT ACATCACAGC GGATCAATCT GGTCCTAAAC ATTTAAATAT CAAGATCACT
CGTGCTAAAT TAGAGTCTCT TGTTGAAGAT ATGGTTAAAT CAACGCTTGA ACCTTTACGT
ATCGCTTTGA AAGATGCAGA TTTATCTGTT GCTGATATCG ATGATGTTAT TTTGGTTGGT
GGTCAAACAC GTATGCCACT TGTACAAAAA TTGGTTACTG AGTTCTTTGG TAAAGAAGCG
CGTAAAGATG TTAACCCTGA TGAAGCTGTT GCTATGGGCG CGGCAATTCA AGGCGCGGTA
CTTTCTGGTG AGAAAACGGA CGTATTATTA TTAGATGTTA CGCCTTTATC ATTAGGTATC
GAAACAATGG GCGGTGTTTT AACTAAAGTT ATTGATAAAA ATACCACTAT CCCAACTAAA
CAATCACAAA CATTCTCCAC AGCTGAAGAT AACCAAAGCG CAGTAACGAT TCATATTTTA
CAAGGTGAAC GTAAACGTGC TACTGACAAT AAATCTCTTG GTCAATTTAA CCTTGAAGGT
ATCCGCAAAG CAAGTCGTGG AACTCCTCAA ATTGAAGTGA CATTTGATAT GGATGCCGAT
GGTATTTTAC ATGTATCTGC TCAAGATAAA GACACTAAGC AAGAGCAAAA AATAACTATT
AAATCTAGTT CAGGTCTTTC CGAAGAAGAA GTTGAAAAAA TGGTTAATGA TGCGGAAGCA
AATGCCGAAG CAGATAAGAA ATTTGAAGAA GTAGTAAAAG CACGTAACCA AGCTGACGCA
ATAGTTCATA CAACACGTAA GCAAATTGAA GAAGCGGGTG ATGCGTTGCC AGCCGATGAA
AAAGAAAAAA TCGAAGCTGC ACTTAAAGAG CTTGATGAAG CGACTAAAGG TGAAGATAAA
GATATTATTG AAGCTAAAAC GACCGCCGTT GCTGAAGCTT CAGAAAAACT GATGGAAATT
GTACAACAAA AAGCACAGGC AGCAGAAGCC GGAGGCGAGG AACAGCCTAA AGAAAAAACC
AAGGAAGAAG ATGACATTGT TGATGCTGAG TTTGAAGAAG TAAAAAAAGA CGATAAAAAA
TAA
 
Protein sequence
MGKIIGIDLG TTNSCVSVLV GGVAKIIENA EGERTTPSII AYTEGETLVG QPAKRQSVTN 
PQNTLFAIKR LIGRRYEDEE VQRDIKIMPY KIVKADNGDA WVEAHGNKMA PPQISAEVLK
KMKKTAEDYL GEKVTGAVIT VPAYFNDAQR QATKDAGRIA GLEVKRIINE PTAAAFAYGV
DSSKGDSVIA VYDLGGGTFD ISIIEIDEVD GEKTFEVLST NGDTHLGGED FDNRLINFLV
AEFKTQQGFD LTNDPLAMQR VKEAAEKAKI ELSSAQQTDI NLPYITADQS GPKHLNIKIT
RAKLESLVED MVKSTLEPLR IALKDADLSV ADIDDVILVG GQTRMPLVQK LVTEFFGKEA
RKDVNPDEAV AMGAAIQGAV LSGEKTDVLL LDVTPLSLGI ETMGGVLTKV IDKNTTIPTK
QSQTFSTAED NQSAVTIHIL QGERKRATDN KSLGQFNLEG IRKASRGTPQ IEVTFDMDAD
GILHVSAQDK DTKQEQKITI KSSSGLSEEE VEKMVNDAEA NAEADKKFEE VVKARNQADA
IVHTTRKQIE EAGDALPADE KEKIEAALKE LDEATKGEDK DIIEAKTTAV AEASEKLMEI
VQQKAQAAEA GGEEQPKEKT KEEDDIVDAE FEEVKKDDKK