Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0916 |
Symbol | grpE |
ID | 4623571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1146899 |
End bp | 1147519 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796120 |
Product | co-chaperone GrpE |
Protein accession | YP_942357 |
Protein GI | 119944677 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.764305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.338613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAG ACAAAAAAAC TATTCCAGAA GAACAAGTTG AAGCTGAGCA AGTTGTAGTA GAAGAAGTTG AAGCCGAGCT AGTTGAAAAT GATGAATCTG CACAACCACA AGAAGAGGCT GAAGCCTCTA ACGAAGACTT AAATATGATT GAAGTACTGA ATAAAAAATT AGCACTTGCA GAGCAACAGA TTGTCGATCA GCAGGCTGAT GTTGCCCGTG CCCAAGCTGA TGTGGTAAAT GCACGTCGGA TTGCCGCTCA AGATGTTCAG AAAGCACACA AATTTGCACT GGTTAAATTT GCTGATGGTT TATTACCCGT GATCGACAGT TTAGAAATGG CGATTAGCCA CGCCGACAAA GAAGATGAAA CGCTAAAACC TATGATTGAA GGCGTTGAAT TAACACTAAA ATCTATGCTT GATACAGTCG ACAAGTTTGG CTTAAAAGTG ATTGATCCAA AAGATGAAGC TTTTGACCCT GAAAAACACC AAGCGATGAG CATGCGCGCA GTCCCTGATG TAGCGCCTAA TCAAGTTATT GCTGTTATGC AAAAAGGGTA TGAATTAAAT GGCCGTGTTA TTCGTCCGGC AATGGTCATG GTGTCTAAGG CTGAGGACTA A
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Protein sequence | MTEDKKTIPE EQVEAEQVVV EEVEAELVEN DESAQPQEEA EASNEDLNMI EVLNKKLALA EQQIVDQQAD VARAQADVVN ARRIAAQDVQ KAHKFALVKF ADGLLPVIDS LEMAISHADK EDETLKPMIE GVELTLKSML DTVDKFGLKV IDPKDEAFDP EKHQAMSMRA VPDVAPNQVI AVMQKGYELN GRVIRPAMVM VSKAED
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