| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0906 |
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| Symbol | |
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| ID | 4624394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1135349 |
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| End bp | 1137061 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639796110 |
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| Product | spermidine synthase |
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| Protein accession | YP_942347 |
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| Protein GI | 119944667 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.975863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.296256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCAGG CAAAAAAAAT AAAACTGCTT ATCGATGACA GCCTGCTGAT ATTAATCATG
GCAGTACTGG CTTGCTGTGG TCTGATTTAT GAGTATTTAC TTTCTCATTA TTCAGCACGT
ATTCTTGGTA GTGTTGAAAC GGTTATTTAT GCGATTATTG GTATTATGAT TGTATCAATG
GGGTTAGGCG CCTTTGCCGC CAAAAAAGTT TCCAATGCCT TTCAAGGTTT TGTTATTTTA
GAATTAGCCG TTGCTTTAAT CGGTTGTTGT GCGACTCTGT TTATCGCCTC GATCATCGGG
TTTGGGCAGA CATTACCGCA TCTGTTGGCT GAAACCTATC AAATCCCGAT GGACACACGA
CCAGAGGGAG GAATGATTGC CCAACTCAAC TGGTTGAGCA TACAATTACC TTACTTTTTT
GCATTTCTTC TTGGCTTTTT GATTGGCATG GAAATACCGC TGATTGCGCG AATTCGTGAA
ACCGTATACG GGCATCATTT AGCCCATAAT GCGGGGACTA TTTACGGGGC TGATTATATC
GGAGCGGGTT TTGGTGCCGC GATTTGGGTA TTGTTTATGC TGCGTATTGA AATCAGCCAG
GCTGCAGCAC TCACCGCTTC TCTCAATTTA GTGGCAGGGT TTGTTTTTCT GCTACGCTTT
AAGCACTACT TAAGGCACAT TAAAAAACTA TTATTAGGGC ATGGCTTGTT AGCTATTTTA
GTGCTTTTGG TTTTCCAATA TGGCGGCAGT TGGCAACAGA AAATGCAAAA CCTTTTGTAT
CAAGATAAGG TGGTTTACCA AACCCAAACA CCTTATCAAA ATTTAGTGTT TACGCAGCGC
AATTTAGGTG GAAATCTTGA GCCCATTTTC AACTTTTATA TTAATGGGCG CTTACAATTC
TCCAGCCTGG ATGAAAAAAT TTACCATGAG TTTTTAGTTC ATCCTGCAAT GCAGGCGGCG
GCACGGCAAA ATAAGATATT GATTATTGGT GGGGGTGACG GTTTGGCATT GCGCGAGGTC
TTAAAATGGC AGCCTGAGAA GGTCACTTTA ATTGATTTGG ATGCGCAGTT AGTTGAATTG
TTTAAATCTC CTCAAGCTGT ATTACCCGCT TATTTAGCAA AGAAAATTAG CGCGTTAACC
GAAAACAGCT TTAATGATAA ACGTGTCACT GTTATTAATG ATGATGCATT TATAACCATT
GATAAGTTAT TACAGCGCAA AAAAATGTTT GATGTGATTA TTATTGACCT GCCGGATCCA
AGCCACCCTG ATTTAAATAA GCTCTACAGT GTTAATTTTT ATTACCGGCT CAATAATTTG
TTAAATGGGG ATGGCGTGAT AGCGATCCAG TCTACATCGC CCTTTCATGC TAAAAATGCT
TTTATCTCAA TTGCTAAAAC TCTAAAAGAA GCTAAATTTC CCTTTGTGGA ACAATACCAT
CAAAATGTGC CTTCATTTGG TGAGTGGGGC TGGACCATTT CTACAAAATT GGGTGCCAGT
GTCAGTAAAC GTTTACAAAA TGCACCATCA TTGTCAGTGC CAACAAGCTG GTTAACTCTG
CCTTTATTAA AAAGTGCTTT TGTTTTTAAT AAAGGTTTTT ATGATGATAT CAATAGTATT
AAAGTAAATT ATTTAGGATC TAATCAACTC TACCGATACC ATCAGCGAGC ATGGGAAAGA
GAGACTGAGT TGCCACCGTC AAATGCCGAT TGA
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| Protein sequence | MVQAKKIKLL IDDSLLILIM AVLACCGLIY EYLLSHYSAR ILGSVETVIY AIIGIMIVSM
GLGAFAAKKV SNAFQGFVIL ELAVALIGCC ATLFIASIIG FGQTLPHLLA ETYQIPMDTR
PEGGMIAQLN WLSIQLPYFF AFLLGFLIGM EIPLIARIRE TVYGHHLAHN AGTIYGADYI
GAGFGAAIWV LFMLRIEISQ AAALTASLNL VAGFVFLLRF KHYLRHIKKL LLGHGLLAIL
VLLVFQYGGS WQQKMQNLLY QDKVVYQTQT PYQNLVFTQR NLGGNLEPIF NFYINGRLQF
SSLDEKIYHE FLVHPAMQAA ARQNKILIIG GGDGLALREV LKWQPEKVTL IDLDAQLVEL
FKSPQAVLPA YLAKKISALT ENSFNDKRVT VINDDAFITI DKLLQRKKMF DVIIIDLPDP
SHPDLNKLYS VNFYYRLNNL LNGDGVIAIQ STSPFHAKNA FISIAKTLKE AKFPFVEQYH
QNVPSFGEWG WTISTKLGAS VSKRLQNAPS LSVPTSWLTL PLLKSAFVFN KGFYDDINSI
KVNYLGSNQL YRYHQRAWER ETELPPSNAD
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