Gene Ping_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0903 
Symbol 
ID4624391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1132631 
End bp1133398 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content44% 
IMG OID639796107 
Product3-deoxy-D-manno-octulosonate cytidylyltransferase 
Protein accessionYP_942344 
Protein GI119944664 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0286516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.514763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTA TTGTCGTGAT ACCCGCGCGT TATCATTCAA CGCGTTTACC GGCTAAACCG 
CTGCTTGATA TTTTAGGGCA AACCATGATT GAGCGGGTGA CTAACCAAGC TTTAAAAAGT
GGCGCCAAAC AAGTTATCGT GGCGACCGAT GATCAGCGCA TTGTTGATGC TTTAAAGCAT
CTTAACGAGA TTGATGTGTG CATGACATCC AAGGATCATC AGTCCGGCAC GGATCGTTTA
GCTGAGGTTT GCCAGCAATT TAAATTGGCC GATGATGAGA TAATAGTCAA TGTGCAGGGA
GATGAACCCT TAATTCCCCC ATCCGTCATT ATACAGGTTG CGACTAACCT GCAGCAAAAC
AGTGCTGCTA GTGTGGCAAC ATTAAGTGCA CCGATTGAAG ACGTTGCCGA TGTTTTTAAT
ACTAATGCCG TAAAAGTGGT TTGTGATAAA AATAATATGG CGTTATATTT CAGTCGCGCC
ACCATTCCAT GGAATCGTGA TGATTTCAGT GTCGAAAATC AGGCTGAAAA ATCCGTAGAT
TTTACTGCTT TACAACGTCA TATTGGTATT TATGCCTACC GCGCTAGTTT TCTCAGGCAG
TATGCAACGT TATCCGTTTC ACCGCTGGAA CTGCTCGAGA AGCTGGAGCA GCTGCGTGTA
TTATGGCATG GTTTTAAAAT TCACGTTGAG CAGGCAAATA AAATCCCACC ACCTGGAATC
GATACTCAGG ATGATTTGCA GCGTGTTATT GATTGTTTAT CGCACTAG
 
Protein sequence
MSFIVVIPAR YHSTRLPAKP LLDILGQTMI ERVTNQALKS GAKQVIVATD DQRIVDALKH 
LNEIDVCMTS KDHQSGTDRL AEVCQQFKLA DDEIIVNVQG DEPLIPPSVI IQVATNLQQN
SAASVATLSA PIEDVADVFN TNAVKVVCDK NNMALYFSRA TIPWNRDDFS VENQAEKSVD
FTALQRHIGI YAYRASFLRQ YATLSVSPLE LLEKLEQLRV LWHGFKIHVE QANKIPPPGI
DTQDDLQRVI DCLSH