| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0900 |
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| Symbol | |
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| ID | 4624388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1129743 |
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| End bp | 1131494 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639796104 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_942341 |
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| Protein GI | 119944661 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0510675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.909726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATA AAGAAGTAAA TAGTTGGCTG GTTTTTAAGC GTTTACTGGG ATACGTTAAA
GAGTTTAAAT TGGGCTTAGT GGCTGCCATT ATCGCAATGA TTGGTTATGC CGTTGTCGAC
ACTGCTTTTA TCTACTCAAT AAAGCCCCTG ATGGATAAAG GGTTGACCGG GCAGAGTCCT
GAAATCTTAA CTTTTATGCC CATTTTTGTG ATTTTAATTA TTGCGGCAAG GGGAGTGGTT
GCCTTCGTTA GTTCATACTG CATGTCGTGG GTAGGCACAC ATGTGGTCAT GAAATTACAA
CGTGAGTTAT TTAGCCATTT AATAGCGTTA CCTATCAGCT TTTTTGATAA AACCAATACC
GGTGACTTGC TCTCTAAAAT CACCTACGAC GCTAATCAGG TAACGTCAGC CTCAACCAAA
GCCTTGATAA AAATATTCCG TGACGGCGCG ACTATTATAG CTTTGGTCGG ACTGATGTTT
ATACAAAGCT GGCAGTTATC ATTAGTTTTC TTTTTGGTTG CGCCGATCGT GGGGATTGCG
ATTAGCGTGG TCAGTAAACG TTTTCGTAAA ATCAGTAAAA ATTTACAAGA TGCAATGGGT
TCAGTGACAA CGGCTTCAGA GCAGATGTTA AAAGGTCATA AAGAAGTGTT AATGTTTGGC
GGCCAAAAAG TTGAAAATGA AAAGTTTAAT CAGGTCAGTA ATTCTGTTCG CTCTCAAAAT
ATGAAAATGG CCAGCGCACA GGCGATAAGT ACTCCTGTAG TACAAACCCT CGCCTCTTTT
GCTTTAGCCT TTATTTTGTT TCTGGCAACC AAACCTTCAA TTATTAATGA CTTAACCCCG
GGTACCTTTA TTGTTATTAT TTCTTCTATG ATGGCATTAA TGAAACCGCT AAAAGTCATT
ACCGAGGTGG TGGGTGATAT ACAGCGTGGT ATTGCTGCCA GTGTGAGTTT ATTCAAAGTA
TTAGATACAA CTTCTGCGCT AGATTCCGGC ACTAAAGTGA TTAAACGTGC CAAGGGTGAT
ATTGAACTAA AGAATATTGT ATTTACCTAC CCAACGACCG AAAAACCTGC TTTAAACAAT
ATTAGTTTTA AGGTCAAGGC GGGGGAAACT TTTGCCTTAG TTGGGCGTTC AGGCAGTGGC
AAATCCACCA TTGCCAATTT ATTAACCCGT TTTTACGATA TTGATAGCGG TGTGATCACT
ATCGATGGTG TCAATATTCA AGAATACACC CTTGCCTCGT TACGCGATCA AGTGGCGATA
GTTTCACAAA GTGTGCATCT GTTTAACGAT ACTATTGCTA ATAATATCGC TTATGCCAGC
GACGGTAAAT TTACCCGGGA AGATATTATC AAAGTGTCTG AAACCGCCAA TGCGATGGAG
TTTATTAAGC AGTTTCCAAA TGGATTAGAC ACTGTTATTG GTGAAAATGG TGCTTTGTTG
TCGGGCGGGC AACGTCAACG ATTGGCCATT GCACGTGCAT TATTGCGTGA TGCACCCATT
TTAATTCTTG ATGAAGCTAC CTCCGCGTTA GATTCGGAAT CTGAACGCCA TATTCAAGCG
GCACTTGATA TATTACAAAA AGACAGAACT TCTATTGTTA TTGCGCATCG TTTATCAACC
ATTGAACATG CCGATCAAAT TTTAGTGATT GATGATGGTA GCGTCGTCGA GCGTGGTACG
CATGCAGAGC TTATTGAGAA AAAAGCGATT TATCACAGCC TTAGCAAAAT TCAAGCGTCT
GGAGAGTTAT AA
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| Protein sequence | MEHKEVNSWL VFKRLLGYVK EFKLGLVAAI IAMIGYAVVD TAFIYSIKPL MDKGLTGQSP
EILTFMPIFV ILIIAARGVV AFVSSYCMSW VGTHVVMKLQ RELFSHLIAL PISFFDKTNT
GDLLSKITYD ANQVTSASTK ALIKIFRDGA TIIALVGLMF IQSWQLSLVF FLVAPIVGIA
ISVVSKRFRK ISKNLQDAMG SVTTASEQML KGHKEVLMFG GQKVENEKFN QVSNSVRSQN
MKMASAQAIS TPVVQTLASF ALAFILFLAT KPSIINDLTP GTFIVIISSM MALMKPLKVI
TEVVGDIQRG IAASVSLFKV LDTTSALDSG TKVIKRAKGD IELKNIVFTY PTTEKPALNN
ISFKVKAGET FALVGRSGSG KSTIANLLTR FYDIDSGVIT IDGVNIQEYT LASLRDQVAI
VSQSVHLFND TIANNIAYAS DGKFTREDII KVSETANAME FIKQFPNGLD TVIGENGALL
SGGQRQRLAI ARALLRDAPI LILDEATSAL DSESERHIQA ALDILQKDRT SIVIAHRLST
IEHADQILVI DDGSVVERGT HAELIEKKAI YHSLSKIQAS GEL
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