Gene Ping_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0892 
Symbol 
ID4624380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1117028 
End bp1117660 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID639796096 
Productenvelope stress induced periplasmic protein, Spy-related 
Protein accessionYP_942333 
Protein GI119944653 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0456939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.690195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA AAAAACTTAG CATCATAGCA TTGGCGCTTG GCCTTACTTT CGCCAATATT 
TCAGTGAGTC AGGCACACGG AGGTATGCAA AATAATGCCG GTGGCTGGAT GCACGGCGGC
ATGATGGATA GCGGAATAAT GAATGGTGGC ATGATGAATG GTGGCATGAT GAATGGTGGC
ATGATAAATG GCGGCATGAT GTATGGTGGT ATGATGAATG GCGGCATGAT GAATGGTGGC
ATGATGAATG GCGGCATGAT GAATGGTGGC ATGATGAATG GCGGCATGAT GTTCTCATCA
TTAAACCTGA CGGGTGAACA GCAGCAGCAA ATTCAATCTA TTATGACAGC GGCTATGGCT
TCGATGCACA GTGGGCCAAA CATGATGACA AATATGCAAG CTAGTACAGC AGAATCACAA
GCACTGTTAA ATAGCCCAAC CTTTGACGAC GCTAAAGCAC GTGAAATAAT AAGTAAACAG
CAGGCCTTAA TGGTTGATAA TCAATTGCAG ATGTTAAAAG CACATCATCA CGCGTTTCAA
GTGTTAACTG AGGCGCAGCA AGAACAAGTT AATACTTTGA TGGCAGAACA TCTTGCCCTG
ATGCAGCAAT ATATGAAGGG GTTTCAGCAG TAG
 
Protein sequence
MNNKKLSIIA LALGLTFANI SVSQAHGGMQ NNAGGWMHGG MMDSGIMNGG MMNGGMMNGG 
MINGGMMYGG MMNGGMMNGG MMNGGMMNGG MMNGGMMFSS LNLTGEQQQQ IQSIMTAAMA
SMHSGPNMMT NMQASTAESQ ALLNSPTFDD AKAREIISKQ QALMVDNQLQ MLKAHHHAFQ
VLTEAQQEQV NTLMAEHLAL MQQYMKGFQQ