Gene Ping_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0890 
Symbol 
ID4625229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1114832 
End bp1115248 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content41% 
IMG OID639796094 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_942331 
Protein GI119944651 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.245575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA TATCAAATAA TGTCGAGCTT GCTGACTGGG AAATCGACAT GACTGCCATT 
CGTGCACAGG GAGCCGGCGG GCAAAATGTG AACAAAGTTT CCAGCGCGAT TCATTTACGC
TTTGATATCA AAAAATCAAC CTTACCCGAT TTTTATAAAG AGAGATTATT AGCATTATCC
GATAGCCGTA TCACAGGCGA TGGCGTGATA ATAATCAAAG CTCAAAGCCA TCGCACGCAA
GAGAAAAATA GAGATGATGC ACTGCAGCGT TTAAAGAACC TGATTGTCTC GGCAGCTGTG
GTTCAAAAAG TACGACGAGC GACGAGAGCC ACAAAAGGTT CACAACGTAA ACGTATGGAT
AAAAAAACCC AAAGGGGACG GATTAAAAAT CTGCGCAGTA AAAATAATGA TGATTAA
 
Protein sequence
MLKISNNVEL ADWEIDMTAI RAQGAGGQNV NKVSSAIHLR FDIKKSTLPD FYKERLLALS 
DSRITGDGVI IIKAQSHRTQ EKNRDDALQR LKNLIVSAAV VQKVRRATRA TKGSQRKRMD
KKTQRGRIKN LRSKNNDD