| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0887 |
|---|
| Symbol | |
|---|
| ID | 4625226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1111965 |
|---|
| End bp | 1113305 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639796091 |
|---|
| Product | Na+/H+ antiporter NhaC |
|---|
| Protein accession | YP_942328 |
|---|
| Protein GI | 119944648 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2056] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.801907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.982246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACC CCGTTGTACT CTCAGTCTGC GTGATGCTGG CTTTGTCTTT AATGCGTATT
AATGTAGTAA TAGCATTAAC ATTAAGTGCA TTAATCGGAG GGTTAAGTGC CGGTATGTCA
GTCTCTGATA CCGTCAGTGC TTTTGAAGGA GGATTGGGTG GCGGTGCAAC CATTGCATTA
AGTTACGCTA TGCTGGGTGC ATTTGCAGTG GCAATTTCTA AATCAGGTAT TACCGATTTA
TTAGCACAAA CAGTTATTAA TAAAGTACAT GGCAGGCACC CGGATCATTT AACCTACGTG
ATAAAATATG TGGTGTTATC TTTAATTTTA TTAATAACTA TTTCATCACA GAATATTATC
CCTGTGCATA TCGCCTTTAT TCCCATTTTA ATTCCACCAC TGATCAGCGT ATTTACAAAA
TTACGTTTAG ACAGACGCTT AGTGGCGTGT ATATTAACCT TTGGTTTAAT CACGCCTTAT
ATGGTTTTAC CGATAGGTTT TGGCGGTATC TTTTTAAATA ATATATTATT AAAAAATTTA
CATGATAATG GCCTGGAAGT AACCGCCAGC CAGGTTCCAA CAGCAATGAT CTTACCTGCT
TTAGGTATGG TTACCGGTTT ACTGATTGCA GTCTTTATTA GCTACCGTAA GCCACGGGAT
TATCCTCAGG GAGAGTCACT ATTTACACCC GCAGAAAATC AAAAACCCGC AAAAACCCCC
TTAAACAAGC GCCATATAGT GGTTGCCTTG ATTGCAATTT CAGCAACATT AAGCATACAG
TTATTGTCAG GCTCGATGAT AGTCGGCGCA TTGGCTGGAT TTGTCGTCTT TACCTTTGGT
GGTGTTATAG CTTGGAAAGA AACGCAAGAT GTATTTACTA AAGGTGTGCA TATGATGGCA
ATGATCGGTT TTATTATGAT TGCCGCTGCC GGTTTTACAG CCGTAATGAA AGCCACGGGT
AGCGTAGACA CCCTGGTTGA GATGTTATCT GCAAATATTG GCCAAAATAA ACCACTAGCA
GCCGTATTAA TGCTGGTAGT CGGTTTGTTA GTGACCATGG GAATAGGCTC TTCTTTTTCA
ACTATTCCAA TTATTGCCAC TATTTACGTT CCTCTTGCCC TCTCATTTGG ATTTTCACCG
ATGGCAATCA TCGCATTAGT TGGAACAGCA GCGGCGTTGG GGGATGCAGG TTCACCGGCG
TCGGACTCGA CTCTGGGGCC GACAGCGGGT CTAAACGCCG ATGGTAAACA CGATCATATT
TGGGATACCG TTGTACCGAC CTTTATTCAC TATAACCTAC CCTTAATGGT ATTTGGCTGG
ATTGCAGCGA TGAGTTTGTA A
|
|---|
| Protein sequence | MINPVVLSVC VMLALSLMRI NVVIALTLSA LIGGLSAGMS VSDTVSAFEG GLGGGATIAL
SYAMLGAFAV AISKSGITDL LAQTVINKVH GRHPDHLTYV IKYVVLSLIL LITISSQNII
PVHIAFIPIL IPPLISVFTK LRLDRRLVAC ILTFGLITPY MVLPIGFGGI FLNNILLKNL
HDNGLEVTAS QVPTAMILPA LGMVTGLLIA VFISYRKPRD YPQGESLFTP AENQKPAKTP
LNKRHIVVAL IAISATLSIQ LLSGSMIVGA LAGFVVFTFG GVIAWKETQD VFTKGVHMMA
MIGFIMIAAA GFTAVMKATG SVDTLVEMLS ANIGQNKPLA AVLMLVVGLL VTMGIGSSFS
TIPIIATIYV PLALSFGFSP MAIIALVGTA AALGDAGSPA SDSTLGPTAG LNADGKHDHI
WDTVVPTFIH YNLPLMVFGW IAAMSL
|
|---|
| |