| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0882 |
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| Symbol | |
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| ID | 4625220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1103992 |
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| End bp | 1105311 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639796085 |
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| Product | ATP-dependent RNA helicase, DEAD box family protein |
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| Protein accession | YP_942323 |
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| Protein GI | 119944643 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.18261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGATCG ATGATTTACC CGTTGACCGC CGTTTAATCA TTTCGTTATC CCACCTTGGA
TTTACTGAAA CCACAGAAAT TCAAGCTAAA GCCGTTCCCA TTGCCGTTGC TGGGAAAGAT
TTACTGGCAT CATCAAAAAC CGGGTCGGGT AAAACATTAG CATATTTGCT ACCTGCTATG
CAGCGCGTTT TAAAAACACG GGCATTAACC AAACGTGATC CGCGTGTTTT AATATTAACG
CCAACACGTG AGCTTGCAAA ACAGGTTTAT GCACAATTGC GTTTATTAGT GTCAAATACC
AGTTTGAAAT CAACCCTAGT ATCAGGGGGA GAAAACTTTA ATGATCAAGT TAAAGCGCTG
GATAAAGACC CGCATTTTGT TGTTGGAACA CCAGGACGAA TTGTTGATCA TTTAAAAAAA
GGGTTGTTAC ATTTAGAAGG CTTAGAGTTA TTAATTTTAG ATGAAGCAGA TCGTATGTTG
GATTTAGGCT TTGCAGAGCA ATTAAAGGCG GTTAACTCGG CAGCGAACCA TCGTTTGCGC
CAAACATTGT TATTTTCAGC CACCTTAGGG CATGCCGAAG TTAATGAATT TGCCAGTGAA
TTATTAAAAG CACCCGTACG TATTGCTATT GGTGAAGAAA ATCAGCAGCA CAGTGAAATT
TCACAGCGTT TTTATCTGGC AGATAACTTA AATCAAAAAG AAAAATTACT TTTCCATTTT
ATAAAAAATG AAGAAATTAA GCAGGCTATT ATCTTCACCG CAACGCGTCT GGATGCACAG
CGTCTAAGTG CTGCTTTAAG TGAAAAAGGC TATGGTACTT TGGCCCTGCA TGGCGATTTA
ACGCAGAATA ACCGTAACAG CATTATGGAC AGTTTTTCCC GTGGTAAAGC CCAGCTATTA
GTGACAACGG ATATCGCCTC CCGCGGATTA GATTTACTCA ATGTCAGTCA TGTGATTAAT
TTTGATATCC CTAAACATAC GGAAGAGTAT ATTCATCGGA TAGGCCGGAC AGGTCGCGCA
GGTGAGAAGG GGGATGCGAT TTCAATTATT GGCCCTAAAG ACTGGGTAAA CTTTAAAAAA
GTCGAAGAGT TTGTGCAGCG ACAGTTAACT TTTAACCGTG TTGATGGCAT TAAACCTCAA
TTTAAAGGTA TTGTTGAAAA AGTAGTTAAG GCACCAGAAA CTAAAGTTGT CAGTCATAAA
GCTGAAAAGA AACAGAGCAG TAAAACGCGT AAACCTAAAG CTGCCCCCAA CAAAATTTTC
CATGAAGCGG AAGAGGCTGG TTTTACACCG ATGCGCCGTA AGAAAAAGAT TGAAGAATAG
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| Protein sequence | MLIDDLPVDR RLIISLSHLG FTETTEIQAK AVPIAVAGKD LLASSKTGSG KTLAYLLPAM
QRVLKTRALT KRDPRVLILT PTRELAKQVY AQLRLLVSNT SLKSTLVSGG ENFNDQVKAL
DKDPHFVVGT PGRIVDHLKK GLLHLEGLEL LILDEADRML DLGFAEQLKA VNSAANHRLR
QTLLFSATLG HAEVNEFASE LLKAPVRIAI GEENQQHSEI SQRFYLADNL NQKEKLLFHF
IKNEEIKQAI IFTATRLDAQ RLSAALSEKG YGTLALHGDL TQNNRNSIMD SFSRGKAQLL
VTTDIASRGL DLLNVSHVIN FDIPKHTEEY IHRIGRTGRA GEKGDAISII GPKDWVNFKK
VEEFVQRQLT FNRVDGIKPQ FKGIVEKVVK APETKVVSHK AEKKQSSKTR KPKAAPNKIF
HEAEEAGFTP MRRKKKIEE
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