Gene Ping_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0877 
Symbol 
ID4625215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1096057 
End bp1096839 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content37% 
IMG OID639796080 
Productalpha/beta hydrolase fold 
Protein accessionYP_942318 
Protein GI119944638 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTTA ATTACCAACA GAAAAAATCG ACTTTACCCG AGTCAAAACA ACCCGCTGAA 
AATATTTTCA TCATACACGG GTTATTTGGC AGTTTATCAA ACCTCTCTGG TTTGGCGAGT
GAATTACAAG AGCTATATCA CACTATTTCT GTTGATTTGA GAAACCATGG TAACAGCCCG
CATGATAACT CAATGACTTA TATCGAAATG GCTAATGATA TATTTTCATT AGCAGATCAT
CTTAATATTG AACACTTTTC TATTGTGGGC CATTCGATGG GCGGAAAAGT AGCCATGGCC
TGCGCTTTAT TAAATCCGCA GCGTGTTAAT AAAATAATCG TCGCGGATAT TGCACCGGTA
GTCTACACCG ATAAACATAA TGATGTCTTT ATTGGCTTAA ATGCGCTTGC AAATGAACCA
ATTCAAACCA GAAAAACAGC GGAATTAACC TTAAGCCCCT ATATTACAAT ACCGGAAACT
CGTCAGTTTT TACTTAAGTC ATTAAGAAAA AAGGGAGAAA ACTTTCACCT GCTGTTTAAT
TTACCGGCAC TTAGCGCAAA CTATGCGACC ATTAGAAGCT GGCCGGAATT TGATGATATT
TTTAATAAAG AAGCGCTTTT TATAAAAGGA GCCGATTCTG ATTATATCCT GCCTGAATAT
CAGGCTAATA TTTTACACTA CTTCCCCAAT GCCAAAGCCA AAATGATTAA AGATACAGGC
CATTGGTTAC ATGCTGAGAA ACCCAAGACC TTTAATCGTT TAGTGAAAGA ATTTCTCAAA
TGA
 
Protein sequence
MLLNYQQKKS TLPESKQPAE NIFIIHGLFG SLSNLSGLAS ELQELYHTIS VDLRNHGNSP 
HDNSMTYIEM ANDIFSLADH LNIEHFSIVG HSMGGKVAMA CALLNPQRVN KIIVADIAPV
VYTDKHNDVF IGLNALANEP IQTRKTAELT LSPYITIPET RQFLLKSLRK KGENFHLLFN
LPALSANYAT IRSWPEFDDI FNKEALFIKG ADSDYILPEY QANILHYFPN AKAKMIKDTG
HWLHAEKPKT FNRLVKEFLK