| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0860 |
|---|
| Symbol | |
|---|
| ID | 4624574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1076210 |
|---|
| End bp | 1077139 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639796063 |
|---|
| Product | agmatinase |
|---|
| Protein accession | YP_942301 |
|---|
| Protein GI | 119944621 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.806171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCTA TTTTTAACCA AGTGGATAAT TCCCTTTACT CAAATGCAAT GACCTTTTTA
CGTCTGCCCA TGCCGACAGA TCCGGTTTCC ACGGATGCCG ATATTGCAGT ATTAGGTTTA
CCCTTTGATT TAGCCACCAC AGGGCGCTCT GGCGCACGTA TGGGGCCAAC AGCAATACGT
CAGGCATCTA TTAATCTTGC ATGGGAAGGT AAACGCTTCC CTTGGAAATT TAATCTCCTA
AAAAAAACCA AGATCATTGA TGCCGGAGAC TTAGTTTACA GCACCGGTGA TGCCAATGCG
TTTACCCAAA AAGTAACCGC CGCAGCAACA CAGTTACTCG CTTCAGGAAA GGCCATTTTA
TCCCTCGGAG GGGATCACTT TGTGACCTTA CCTTTGTTGC GTGCCCACCA TCAAAAATTT
GGGAAAATGG CCTTAATACA TTTTGATGCG CATACTGATA CTTATCATGA TGGCAGTGCT
TATGATCATG GCACTATGTT TTATCATGCG CCCAAGGAAG GCTTGATTGA TCCGGAAAAG
TCGGTACAAA TAGGGATCCG CACGGCTTAT AATGAAACTG GCCACGGTTT TAATGTCATC
AATGCACCCC AAGCTAATGA TATGCGAGCT GAGCAGATTG CCTCTTTTAT TAAAGAGAAA
GTTCAGACTA TGCCTGTGTA TCTTACTTTT GATATCGATT GTTTAGATCC GGCCTTTGCA
CCCGGTACAG GCACACCCGT ATGTGGTGGA TTAAGCACAG ATAAAATATT AAAAATATTA
CGCGCATTAA CGGATATCAA TATTGTCGGT ATGGATGTTG TCGAAGTTGC ACCCGCCTAT
GATAATAGCG AGATCACCGC GCTGGCGGCT GCCACAATAG GGGTGGAGTT GCTGCATTTG
TGGACAATAA AAAATAAAGA CATCTGCTAA
|
|---|
| Protein sequence | MNSIFNQVDN SLYSNAMTFL RLPMPTDPVS TDADIAVLGL PFDLATTGRS GARMGPTAIR
QASINLAWEG KRFPWKFNLL KKTKIIDAGD LVYSTGDANA FTQKVTAAAT QLLASGKAIL
SLGGDHFVTL PLLRAHHQKF GKMALIHFDA HTDTYHDGSA YDHGTMFYHA PKEGLIDPEK
SVQIGIRTAY NETGHGFNVI NAPQANDMRA EQIASFIKEK VQTMPVYLTF DIDCLDPAFA
PGTGTPVCGG LSTDKILKIL RALTDINIVG MDVVEVAPAY DNSEITALAA ATIGVELLHL
WTIKNKDIC
|
|---|
| |