| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0851 |
|---|
| Symbol | |
|---|
| ID | 4626616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1064059 |
|---|
| End bp | 1068846 |
|---|
| Gene Length | 4788 bp |
|---|
| Protein Length | 1595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639796054 |
|---|
| Product | NAD-glutamate dehydrogenase |
|---|
| Protein accession | YP_942292 |
|---|
| Protein GI | 119944612 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.601054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA TACTCAACCA AAAAAATGAC ATTTTAGATC AAATTTTTTC TCAATTAAAA
AGTTATTTTT CTGAATCGGA ACAACAAACT GTCGAGCAGT TTATTAAAAC TATTTTCCGT
GATGTGGCTA TCGCCGATTT AACGCCAATA CCATTAACAG ATCTGGCCGG ACTGACGGGT
TCATTATGGC GAGAGACGGC TAAATGGAAA GGTAGCCGGG CAAAAGTACG TGTTTTTAAT
CCCGATGTTG AGCAAGATGA ATGGAAATCT ACTCATACGG TATTGACGGT ATTATGCCGT
AATACTCCCT TTGTGATTGA TACGCTAAAA CTTGTCCTCA ATGAGCAAAA TATTAAATTA
CATCGTGTTT ATTATGGGGA AATGTCCAGC CAACGGGACA AAAATGGGAC ATTAATCTCT
TTCAATGAAG AAAAATTAAA TGAATTGTTA CTTTATTTTG AAATTGATAA CACCAGTTCA
AAAAAAGAAC GCGATCAGAT ATCAGCTAAA ATACAAACAG CATTAGAAAA TGTGGCTTTA
GTGGGTGATG ATTTTGCAGC ATTAAAAAAC ACCCTGACAG AAGCCATCGA AATCAGTAAA
ACGGATAATT TAAAAGAACA TATTGATAAC TTAAGAGAAC AGCAAACCTA TTTATTATGG
GTGTTAAAGG ATCATTTTAC TTTTCTCGGT TGTGATCAAT TTAGTGTTGA AAATGGAAAA
ATCAATGTCA TTGAGGGGAG TCAGTTAGGT TTATTGAAGC GTCCTGATTT TATGACTAAA
GCCCATGATT TTGAATCGTT TTCAATACTT AATGAGAAGA CATTTATCCA TTTCAGCAAA
GCCTCTCAAC GTGCGATGGT TCACCGCAGA GCTTTTCCTG ATGTTATTTA TATCAAACGT
TTTAATGCCG CAGGGGAGCT GATTTCCGGT TTTCGTTTTG TCGGCTTATA TACCTCTTCG
GTTTACAGTG GTACACCCAC TGAGATGCCC GTAATACGTG ACAAATTAGC GAATATGTTA
AAACAATCGC CTTATAGTCA AGGGGGGCAT TATTATAAAG AGTTATCACA AATATTATAT
ACCTACCCGA TTGAAGATTT ACTGTTATGT GATGAAACTG GATTATTAAA AAATGCCACT
GAAATATTAC ATGCTCAGGA GCGCAAAGAA TTAAAATTAT TTTTACGTAT GGATGGTAAT
AATCAATTTG TCGTTGCCAT CTTATATGTT CCACGAGATG TTTATAATAC GAGGGTAAGA
CTTGATTTTG AAGAGTTAAT TTGTCGTACT CTGGAAGTCA CTGATCGTGA TTTTCAAACC
TACTTAAGTG AATCAAATTT AGCACGTTTA CGTTTGGTAT TACGCTTAAA AGCGCCCCTT
GAATACCCAT TAGAAGTGCA GGCCATACAA GATCGCATGA AACAGTTAAC CAAGCTCTGG
AGCGAGGGTT TACAGGAATC TTTAGTTGAA AACTTTGGCG AAGAACGTGG TATAAAACTG
GTTAAAAAAT ACCAGTCATC ATTTTCAACA AGTTATAAAG ACAGTTTTAG TGCCCGCGTT
GCAGTGTCCG ATATTGAACG CATCGAGTCC GTCTATGCAG ATAAAGAACG GTCTATGGCA
TTGCGTTTTT ATCGTTCTCT GGATCCTAAT GGCAGTCAGT TAAAATTAAA ACTTTTCCAT
CAGGATGGTG CTTTATTATT ATCGGATCTT ATCCCTATTC TGGAAAATCT CGGGCTTAAA
GTGGCGGAAG AATACCCTTA TAAAGTGACC CCGAATAGAG AACAGTCATT CTGGTTATAT
GATTTCACCT TAATTTATTC ACGTGTTACT GATTTTAATC CAGATGCTTA CCACGATGTT
TTTGTCGATA CATTTTTATC TGTCTGGTAT GGAAGAGCTG AAAATGACTC TTTTAATAAA
CTAATTTTGA GGACGGGATT AACGTGGCGT GATATTGCAA TGTTGCGTGC TTATGCCAAA
TACTTAAAAC AGATACGTTT TGGTTTTAGT CAATCTGCAA TAGCAAAAAC AATGTTAGAC
CATAGCAAGT TAGTTATCGA GTTAGTGCAA CTCTTTAAGT TACGCTTTGA CCCAAGTAAC
GAAATTAATT TAGAAAAGCA GCAAAAATTA GAAGAAAAAA TTCTAACCTC ATTAAATGAC
GTGACTAATC TTAATGAAGA CCGTGTATTA AGGCAGTATG TTGAGCTTAT CATGGCCACT
ATTCGGACCA ATTATTTCCA GAAAAGTGAG GGAGAAAATC AACCTTATAT CAGTTTTAAG
TTTGATCACG CTAAATTATC TGAGATTCCG TTACCGCGTT TAAATGTTGA AATTTTTGTT
TATTCACCGC GCGTAGAAGG AGTGCATTTA CGCGGCGGCA AAGTTGCCCG TGGTGGTTTG
CGTTGGTCTG ATCGTCGTGA AGATTACCGT ACTGAGGTAT TAGGATTAGT GAAAGCACAG
CAGGTTAAAA ATGCGGTGAT TGTGCCCGTC GGTGCTAAAG GCGGTTTTGT TGCTAAAAAA
CTCAATGCTT CTATGGACAG AGATAGTTTT ATGAAGGAGG GGATTAGCAG CTACAAATTG
TTTGTTAGCG CATTACTTGA TCTTAGCGAT AACCTCGATC AAGGCCGAGT AATTCCACCC
GTTGATGTGG TTCGTTATGA CGAAGATGAT ACCTATCTTG TTGTTGCAGC AGATAAAGGA
ACAGCTACTT TTTCTGATTT TGCCAATGAA CTCGCGGTAG CAAGAAATTT CTGGCTAAAT
GATGCATTCG CCTCGGGTGG TAGCCATGGT TACGACCATA AGGTCATGGG TATTACCGCG
CGTGGTGCAT GGATTAGTGT ACAGCGTCAC TTTCGTGAAT TGGGTGTTAA TGTACAAAAG
GATCCTATCA GTGTGATCGG TATAGGTGAT ATGGCGGGTG ATGTATTTGG CAACGGTATG
TTAAGTTCAC AATCGATACG CTTGGTTGCT GCCTTTAATC ACCTGCATAT ATTTATTGAT
CCGAATCCGA CTGATCAAGC GGCGTGTTTT ACGGAGCGAA AACGCTTATA TGATACGCCG
AAAACGGGTT GGAATGATTA CGATAAAGCG TTAATTTCTG CAGGAGGCGG GGTTTTTGAA
CGTCGAGCTA AGTCAATAAA CGTTTCTCCT GAAATGGCCA AACGTTTCGA TATTCAAAAA
CAGAAAGTAA CACCTAATGA ATTGATCTCG CTATTATTAA AAGCGCAAGT TGATCTGATT
TGGAATGGTG GCATCGGTAC CTACATAAAA GCCAGCAGTC AGAGTCATGC TGATGTAGGT
GATAAAGCCA ATGATGTGTT ACGTGTCAAT GCAAAACAAC TGCGCTGTCG TGTGCTGGGT
GAAGGTGGAA ATTTAGGTGT AACACAATCT GCCCGTATTG AATATGCATT AAACGGCGGT
TTATGTTTCA CCGATGCGAT TGATAATGCA GGAGGAGTGA ACTGTTCGGA TTTAGAAGTT
AATATTAAAA TCCTACTTGA TAAACTGGTC TCTGATGGGG ATTTAACGGT TAAACAACGT
AATATTTGGT TAGTTACTAT GACCGATCAG GTTGGACAAT TGGTGCTTAA AAATAATTAT
CGGCAAGCGC AGAGTATCAG CCTCTCTTAC GTTGAATCAT ATAAACGTAT TGAAGAGTAT
CGTCGTCTGA TATGTAATTT AGAAGAAAAA GGCAAGCTTA ACCGTGCACT TGAATTTATT
CCTACGGAGG ATGTGCTTAA TGAACGTAAA AATAGTCACC TCGGTTTGAC GCGACCTTGT
ATTGCGGTGA TGTTAGCTTA TGCCAAAAAT GAATTGAAAG AAGCCCTGGT CGCTGAGCAT
GTTGCTTCTG ATCCTTGTTT GATTAAAGAG GCAGAAAAAA TATTCCCTCG ATCGCTGGTG
GATAAATATA AAAATGAAGT TCATCGTCAT CCGCTTATCA ATGAAATTGT TGCCACGCAA
ATAAGTAATG ATATTTTCAA CTGCATGGGG ACAACCTTTG TACATCGTTT AATGGCCAGC
GCAGGCTGCT CATTTTTAGA TGTCTGTAAA GCGTGGGTGG CAGCAAGAGA AATTTTCGCT
ATGACTTCGC TTTTGGAAGA TATTGAAGGG TTAGATAATC AAGTTCCTGT CAGTGTGCAA
AATGATTTAA TGCTGCAGTT AAAACGTATG GTGCAGCGCG GTACGCGTTG GATCATTAGT
ACCCATCGTA CAGATCTTGA TATCAGCATG CTGATTAAAC AATATCAGGA GCCTCTGAGT
ACGTTAGCGG AACAATTTGA TAACATATTA ACCGGATCAT CTCTTCTTCA TAGACAAAAA
TCCCTGACTG AATTAACCGC AAAGAATGTA CCGGATAAAT TGGCACATTC TCTGGCAAGT
GTGGATAAAA TTTATGCCAT GTTGGGTGTT ATTTCAGTTG CCGCAAAAGT GAAAATTGAA
CCTCAACTTG CAGTGCAGGT TTATTTCCAC TGCGGTGATC ATTTGAAATT ATTTGATGTC
GCTGAGCAAC TTAGCCTTTT ACCGGCAGAT AATAATTGGC AATCGCTTGC CAGAGAAGCA
ATGCGTGATG ATCTTGAATG GCAGCATATG CGGATCACTA AGAGTATATT AGAAATGGTC
AAAGAAAGTA CAGATGTTGG GGATGCCTAT GTTGATTGGC ACACCTCAAA TCATATGCTT
TTTGATCGCT GGCAACGTAT GGCTGATGCA CTATTGGCCG CTAGTCCTCC AGAGTTTAGT
ATGTGTCAGG TGGCGTTACG TGAGCTGCTG GATCTATCTC AGAGTTAG
|
|---|
| Protein sequence | MKSILNQKND ILDQIFSQLK SYFSESEQQT VEQFIKTIFR DVAIADLTPI PLTDLAGLTG
SLWRETAKWK GSRAKVRVFN PDVEQDEWKS THTVLTVLCR NTPFVIDTLK LVLNEQNIKL
HRVYYGEMSS QRDKNGTLIS FNEEKLNELL LYFEIDNTSS KKERDQISAK IQTALENVAL
VGDDFAALKN TLTEAIEISK TDNLKEHIDN LREQQTYLLW VLKDHFTFLG CDQFSVENGK
INVIEGSQLG LLKRPDFMTK AHDFESFSIL NEKTFIHFSK ASQRAMVHRR AFPDVIYIKR
FNAAGELISG FRFVGLYTSS VYSGTPTEMP VIRDKLANML KQSPYSQGGH YYKELSQILY
TYPIEDLLLC DETGLLKNAT EILHAQERKE LKLFLRMDGN NQFVVAILYV PRDVYNTRVR
LDFEELICRT LEVTDRDFQT YLSESNLARL RLVLRLKAPL EYPLEVQAIQ DRMKQLTKLW
SEGLQESLVE NFGEERGIKL VKKYQSSFST SYKDSFSARV AVSDIERIES VYADKERSMA
LRFYRSLDPN GSQLKLKLFH QDGALLLSDL IPILENLGLK VAEEYPYKVT PNREQSFWLY
DFTLIYSRVT DFNPDAYHDV FVDTFLSVWY GRAENDSFNK LILRTGLTWR DIAMLRAYAK
YLKQIRFGFS QSAIAKTMLD HSKLVIELVQ LFKLRFDPSN EINLEKQQKL EEKILTSLND
VTNLNEDRVL RQYVELIMAT IRTNYFQKSE GENQPYISFK FDHAKLSEIP LPRLNVEIFV
YSPRVEGVHL RGGKVARGGL RWSDRREDYR TEVLGLVKAQ QVKNAVIVPV GAKGGFVAKK
LNASMDRDSF MKEGISSYKL FVSALLDLSD NLDQGRVIPP VDVVRYDEDD TYLVVAADKG
TATFSDFANE LAVARNFWLN DAFASGGSHG YDHKVMGITA RGAWISVQRH FRELGVNVQK
DPISVIGIGD MAGDVFGNGM LSSQSIRLVA AFNHLHIFID PNPTDQAACF TERKRLYDTP
KTGWNDYDKA LISAGGGVFE RRAKSINVSP EMAKRFDIQK QKVTPNELIS LLLKAQVDLI
WNGGIGTYIK ASSQSHADVG DKANDVLRVN AKQLRCRVLG EGGNLGVTQS ARIEYALNGG
LCFTDAIDNA GGVNCSDLEV NIKILLDKLV SDGDLTVKQR NIWLVTMTDQ VGQLVLKNNY
RQAQSISLSY VESYKRIEEY RRLICNLEEK GKLNRALEFI PTEDVLNERK NSHLGLTRPC
IAVMLAYAKN ELKEALVAEH VASDPCLIKE AEKIFPRSLV DKYKNEVHRH PLINEIVATQ
ISNDIFNCMG TTFVHRLMAS AGCSFLDVCK AWVAAREIFA MTSLLEDIEG LDNQVPVSVQ
NDLMLQLKRM VQRGTRWIIS THRTDLDISM LIKQYQEPLS TLAEQFDNIL TGSSLLHRQK
SLTELTAKNV PDKLAHSLAS VDKIYAMLGV ISVAAKVKIE PQLAVQVYFH CGDHLKLFDV
AEQLSLLPAD NNWQSLAREA MRDDLEWQHM RITKSILEMV KESTDVGDAY VDWHTSNHML
FDRWQRMADA LLAASPPEFS MCQVALRELL DLSQS
|
|---|
| |