Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0836 |
Symbol | |
ID | 4625864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1045338 |
End bp | 1047137 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639796040 |
Product | sensor histidine kinase PAS domain-containing protein |
Protein accession | YP_942278 |
Protein GI | 119944598 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.342989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.397263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAT CATCTCTGTT TAAACCCAGT TTACTGCGTC GTTTATTTGT CGGGTATGTG GTTCTTATAC TAAGTCTAAC CATTATTGTG AGTGTATTAA TTAGCCGACA AACTACTGAA AATACCTTAC AAGAAATCCA TCATTCTTTA CTTATTCGCG CACAGTTTTT GGCCGAATTA TCAAAATCTG TTTTCCCCAC ACCTCCTCAA GCATCATTGG CTGCCCTCAA TCAGAAAATT GTAGCATTAG GTAAAAAAAC ACAAAGTAGA CTAACACTTA TTACCGAAAA CGGCAGAGTA TTGGCCGACT CCCAAAAAGC CCCTCAGAGC ATGGATAATC ACGCTAATCG CCCCGAAATT ATCGCAGCAC GGCAACAACA TATTGTCCCC ACCACGCGAT TTAGCGATAC TTTACAAAAA AATATGATTT ATCTCGCACT GCCCATTATT ATTGAGCAAA AAGTTCAGGG TTTTGTTCGT GTGTCTTTAC CGATCACTAT AATAGATAAC AAATTATCGC AATTACGTTT TGCATTGGCA CTCAGTGCCT TTATTTCTGC GTTAGTGGCA TTAATTTTAG GTTATTATTT TGTGGAACGT TTTTCAGCAC CGTTAAGAAA AATAACGGCA GTGGCAGAGG CTATCTCCAA AGGTGATTAT AGCAAACGTA TTATTACCCA TCAAAAGGAC GAAATTGGCT TATTGGCAAA TTCCTTTAAT CTGATGGCAC AAAGCGCTGA AAAACGCCTC GATCAAATTG AAACAGAACG CAACCGTTTA GCCATCATTT TTGCGGGTAT GGTGGAAGGG GTTATTTATA TTAATGAGCA CCTTCAGATT ATCCACATGA ATCAAGTGGC CGCGCAGATG TTTAACTTGT CGAATACTAG CTCTATTAAT CAACCCTTAG CAGAACAGAT TCCGGTACCT GAGATAACAG CTGCAGTGCA GGCTGCGATT GCAAACCAAG GTGTGGTTAA AACGAAAATT CAAAATAATG ATCACGCTAA AAATGCCGAA GTTATCGATA TTTATGTTGC CGCACTCAGT AATGATTTAG GTGAATCTGT TGGCGTTGTG GTGGTACTCA ATGATATATC TGAGCTTGCT TATTTGGAAA GAGTACGGCG TGATTTTGTT GCAAATGCCT CTCACGAGCT TAAAACCCCA ATCACGGTGA TCTTGGGTTT AGCTGAAACC ATATTAGATT ATAAAGATAT GCCTGAGAAC ATGCGCACTC GGTTTATGGG TGATATACAA ACACAAACAT TGCGCCTTTC TTCATTAGTT ACTGATTTAA TGAGTATCTC TCGTTTAGAA ACAACTCAAA ATGGCGTAAT GACTGAAACA GTAGATTTAA CGGCCAGTGT CAAAAATGCG CTTTCTAATG TAGATAATAT TTGCCGGGAG AAAAAAATAA CCCTTTCAAA TAGGTTACCA AAGGGAGAAA TGTTGATCAA TGGTGACAAG GAAGAAATAA ATCAACTCAT TGATAATCTG ATCGGTAATG CCATTAAATA CACACCTTCG TTAGGTCATG TCAGTGTGAC TTTAAAAGCG TTAGATGAGC AGGCTCAGAT AATAGTAAAG GATACCGGCA TTGGTATCAG TTTGTCACAT CAGCAACGTA TTTTTGAACG CTTCTATCGT GTCGATAAAG CTCGCTCCCG GGATTTAGGT GGAACAGGAT TAGGTCTATC GATTGTAAAA AATATTGTTG AAAAACATAA AGGAACTATC TCCGTTAGCA GTATCGAAAA TCATGGTTCG ACGTTTACCC TGTTGCTGCC ACTGAGTTAA
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Protein sequence | MLKSSLFKPS LLRRLFVGYV VLILSLTIIV SVLISRQTTE NTLQEIHHSL LIRAQFLAEL SKSVFPTPPQ ASLAALNQKI VALGKKTQSR LTLITENGRV LADSQKAPQS MDNHANRPEI IAARQQHIVP TTRFSDTLQK NMIYLALPII IEQKVQGFVR VSLPITIIDN KLSQLRFALA LSAFISALVA LILGYYFVER FSAPLRKITA VAEAISKGDY SKRIITHQKD EIGLLANSFN LMAQSAEKRL DQIETERNRL AIIFAGMVEG VIYINEHLQI IHMNQVAAQM FNLSNTSSIN QPLAEQIPVP EITAAVQAAI ANQGVVKTKI QNNDHAKNAE VIDIYVAALS NDLGESVGVV VVLNDISELA YLERVRRDFV ANASHELKTP ITVILGLAET ILDYKDMPEN MRTRFMGDIQ TQTLRLSSLV TDLMSISRLE TTQNGVMTET VDLTASVKNA LSNVDNICRE KKITLSNRLP KGEMLINGDK EEINQLIDNL IGNAIKYTPS LGHVSVTLKA LDEQAQIIVK DTGIGISLSH QQRIFERFYR VDKARSRDLG GTGLGLSIVK NIVEKHKGTI SVSSIENHGS TFTLLLPLS
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