Gene Ping_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0836 
Symbol 
ID4625864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1045338 
End bp1047137 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content39% 
IMG OID639796040 
Productsensor histidine kinase PAS domain-containing protein 
Protein accessionYP_942278 
Protein GI119944598 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.342989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.397263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAT CATCTCTGTT TAAACCCAGT TTACTGCGTC GTTTATTTGT CGGGTATGTG 
GTTCTTATAC TAAGTCTAAC CATTATTGTG AGTGTATTAA TTAGCCGACA AACTACTGAA
AATACCTTAC AAGAAATCCA TCATTCTTTA CTTATTCGCG CACAGTTTTT GGCCGAATTA
TCAAAATCTG TTTTCCCCAC ACCTCCTCAA GCATCATTGG CTGCCCTCAA TCAGAAAATT
GTAGCATTAG GTAAAAAAAC ACAAAGTAGA CTAACACTTA TTACCGAAAA CGGCAGAGTA
TTGGCCGACT CCCAAAAAGC CCCTCAGAGC ATGGATAATC ACGCTAATCG CCCCGAAATT
ATCGCAGCAC GGCAACAACA TATTGTCCCC ACCACGCGAT TTAGCGATAC TTTACAAAAA
AATATGATTT ATCTCGCACT GCCCATTATT ATTGAGCAAA AAGTTCAGGG TTTTGTTCGT
GTGTCTTTAC CGATCACTAT AATAGATAAC AAATTATCGC AATTACGTTT TGCATTGGCA
CTCAGTGCCT TTATTTCTGC GTTAGTGGCA TTAATTTTAG GTTATTATTT TGTGGAACGT
TTTTCAGCAC CGTTAAGAAA AATAACGGCA GTGGCAGAGG CTATCTCCAA AGGTGATTAT
AGCAAACGTA TTATTACCCA TCAAAAGGAC GAAATTGGCT TATTGGCAAA TTCCTTTAAT
CTGATGGCAC AAAGCGCTGA AAAACGCCTC GATCAAATTG AAACAGAACG CAACCGTTTA
GCCATCATTT TTGCGGGTAT GGTGGAAGGG GTTATTTATA TTAATGAGCA CCTTCAGATT
ATCCACATGA ATCAAGTGGC CGCGCAGATG TTTAACTTGT CGAATACTAG CTCTATTAAT
CAACCCTTAG CAGAACAGAT TCCGGTACCT GAGATAACAG CTGCAGTGCA GGCTGCGATT
GCAAACCAAG GTGTGGTTAA AACGAAAATT CAAAATAATG ATCACGCTAA AAATGCCGAA
GTTATCGATA TTTATGTTGC CGCACTCAGT AATGATTTAG GTGAATCTGT TGGCGTTGTG
GTGGTACTCA ATGATATATC TGAGCTTGCT TATTTGGAAA GAGTACGGCG TGATTTTGTT
GCAAATGCCT CTCACGAGCT TAAAACCCCA ATCACGGTGA TCTTGGGTTT AGCTGAAACC
ATATTAGATT ATAAAGATAT GCCTGAGAAC ATGCGCACTC GGTTTATGGG TGATATACAA
ACACAAACAT TGCGCCTTTC TTCATTAGTT ACTGATTTAA TGAGTATCTC TCGTTTAGAA
ACAACTCAAA ATGGCGTAAT GACTGAAACA GTAGATTTAA CGGCCAGTGT CAAAAATGCG
CTTTCTAATG TAGATAATAT TTGCCGGGAG AAAAAAATAA CCCTTTCAAA TAGGTTACCA
AAGGGAGAAA TGTTGATCAA TGGTGACAAG GAAGAAATAA ATCAACTCAT TGATAATCTG
ATCGGTAATG CCATTAAATA CACACCTTCG TTAGGTCATG TCAGTGTGAC TTTAAAAGCG
TTAGATGAGC AGGCTCAGAT AATAGTAAAG GATACCGGCA TTGGTATCAG TTTGTCACAT
CAGCAACGTA TTTTTGAACG CTTCTATCGT GTCGATAAAG CTCGCTCCCG GGATTTAGGT
GGAACAGGAT TAGGTCTATC GATTGTAAAA AATATTGTTG AAAAACATAA AGGAACTATC
TCCGTTAGCA GTATCGAAAA TCATGGTTCG ACGTTTACCC TGTTGCTGCC ACTGAGTTAA
 
Protein sequence
MLKSSLFKPS LLRRLFVGYV VLILSLTIIV SVLISRQTTE NTLQEIHHSL LIRAQFLAEL 
SKSVFPTPPQ ASLAALNQKI VALGKKTQSR LTLITENGRV LADSQKAPQS MDNHANRPEI
IAARQQHIVP TTRFSDTLQK NMIYLALPII IEQKVQGFVR VSLPITIIDN KLSQLRFALA
LSAFISALVA LILGYYFVER FSAPLRKITA VAEAISKGDY SKRIITHQKD EIGLLANSFN
LMAQSAEKRL DQIETERNRL AIIFAGMVEG VIYINEHLQI IHMNQVAAQM FNLSNTSSIN
QPLAEQIPVP EITAAVQAAI ANQGVVKTKI QNNDHAKNAE VIDIYVAALS NDLGESVGVV
VVLNDISELA YLERVRRDFV ANASHELKTP ITVILGLAET ILDYKDMPEN MRTRFMGDIQ
TQTLRLSSLV TDLMSISRLE TTQNGVMTET VDLTASVKNA LSNVDNICRE KKITLSNRLP
KGEMLINGDK EEINQLIDNL IGNAIKYTPS LGHVSVTLKA LDEQAQIIVK DTGIGISLSH
QQRIFERFYR VDKARSRDLG GTGLGLSIVK NIVEKHKGTI SVSSIENHGS TFTLLLPLS